Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi415g00019 ATGGCACCCTGCAGAAAAAAAGATGGACCAACTAAGAAAACAATGAACAGAGGAGCATGGACCCCAGAGGAAGATCAAAAGCTAGCTCATTGCATTCAAACTCATGGTGCCAAGAAATGGAAAACTGTTTCAGCCAGATCAGGTTTGAATAGGTGTGGAAAGAGTTGTAGGTTAAGATGGCTGAACTATCTTAGACCCAATATCAAGAGAGGGAACATTTCAGATGATGAAGAGGATTTGATTCTTAGGCTTCACAAACTTCTAGGAAACAGGTGGTCTTTGATAGCTGGGAGGCTTCCGGGACGAACAGACAATGAAATTAAGAACTATTGGAATTCTCATTTGTGCAAAAAAGCCACTCACGTTGAGGAAAAACCAGAAACTTCCACAACACAAGAAACTATAATTCAAGACAATATTGTTGGGGATAGTGTTGTATTAGAGAATAAAGATTCGATTAATGGAAGTGTTGATTCTGATGTTCTCTTTGATGTGAATGAATTCTTAGACTTTTCCATTGATGAACCATATGAGTTTGATTGGGTGAATAAACTCTTGGAATTTGACCAGATTCAGTTGCCTGAGAACACAAATATCTGA 600 0.385 MAPCRKKDGPTKKTMNRGAWTPEEDQKLAHCIQTHGAKKWKTVSARSGLNRCGKSCRLRWLNYLRPNIKRGNISDDEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKATHVEEKPETSTTQETIIQDNIVGDSVVLENKDSINGSVDSDVLFDVNEFLDFSIDEPYEFDWVNKLLEFDQIQLPENTNI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi415g00019 199 CDD SANT 74 115 IPR001005 -
Vivi415g00019 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Vivi415g00019 199 Gene3D - 10 70 - -
Vivi415g00019 199 SMART sant 16 66 IPR001005 -
Vivi415g00019 199 SMART sant 69 117 IPR001005 -
Vivi415g00019 199 MobiDBLite consensus disorder prediction 1 20 - -
Vivi415g00019 199 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Vivi415g00019 199 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Vivi415g00019 199 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Vivi415g00019 199 FunFam MYB-related transcription factor 16 69 - -
Vivi415g00019 199 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Vivi415g00019 199 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 127 - -
Vivi415g00019 199 CDD SANT 19 64 IPR001005 -
Vivi415g00019 199 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Vivi415g00019 199 FunFam Transcription factor TT2 73 141 - -
Vivi415g00019 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Vivi415g00019 199 Gene3D - 74 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi415g00019 3 128 MYB Transcription Factor Family AT3G13540 63.281 5.20e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi415g00019 Myb_DNA-binding 7.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi415g00019 K09422 - gmx:100799575 271.552