Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi414g00002 ATGAGTCCATACCTTTTCAGTTTGCTGTTTGCATTGATTTGTTTAAGAGTGAACTCATCTGTGGAATCTGTGGAAGAGTACAAGATCGTTACTCTACCCTATCAACCAGCGGTTGATTTCCACCAATATTCCGGTTATGTAACCGTTGATGAACACAATGGAAGAAATCTTTTCTTCTACTTCGTGGAGGCTCAAGTTGAGCCTGCTTCCAAGCCTCTGCTTCTCTGGATTAACGGAGGGCCTATATGTTCTACATATGGAGGGGGAGCTTTCTCAGGGAACGGGCCTTTCTGGCCCACAAGTAATGGCCGACTAGTCAAAAATACATACAGTTGGAATAGAGAAGCCAACATGTTATATTTGGACTCTCCCGCTGGATTTGGATTTTCCTACTCGGAAAATGCTTCTGATTATTTTACCAATGATAAATTAACTGCAAGGGATAACCTAGTTTTTCTCACACATTGGTTCAATAAATTCCCTCAATATAGAACCAATGATTTCTTCATCACTGGGGAGAACTATGCAGGGCACTATGCACCGCAACTTGCAGAGCTTATCCTCCAATCAAAAGTTAACATCAATCTGAAAGGGATAGCCATCGGAAATCCCCTTCTCAAATTTGAAACCGATTTTAACTCGGCTACTGAATTTTTGATGTCTCATGGACCAATATCGAAAAAAACATATCATATGTTGAATAATGTATGCAACATGGCAACTTTAAAGAGACAAATTCAATCCGGGAATTTTAGTACCAATTGTTCCAAAGTGAATTTGCAATTGTCAAAGGATCTGGCATATACGGACCCTTTCGACGTGTCTGCTGAATTTTGTCCACAGCCACCCGAACAACAAGCATACATGTTGACTAAACAGCAAGCTGGAGAAAACCTAGATGTATGTGTGGGTGACGAGACAACCACATACATGAATAGAAAGGATGTCCAAAACGCTATGCATGCCAAGCTTGTCGGTGTGAAAAGTTGGTCATCATGCAGCGGTATTGTTGTGTATGACATTCAAAGCCTCGAGAATTCAACCATATCTATACTAGGGACACTTGTTAAGTCAGGTGTAAGGGTACTAGTATACAGTGGTGCTCAGGATTCTGTGATTCCATTTTTGGGGACACAGTCCTTAATAGATCAGTTGGCCGAGGATTTTGGATTTAACACAACAAAGCCCGATAAAGTCTGGTTTGTGGGACGACAGGTTGCCGGATCCACTATGGAGTATGATGACATCCTTACATATGCAACTGTCATAGGAGCGGGTCATTCGGTTCCTTTCTCTCAACCAGAGAGAGCTTTGAAGTTGATTCAGACTTTTCTTAAAGGAAAATCACTTCAAAATGAACTGTGA 1365 0.4132 MSPYLFSLLFALICLRVNSSVESVEEYKIVTLPYQPAVDFHQYSGYVTVDEHNGRNLFFYFVEAQVEPASKPLLLWINGGPICSTYGGGAFSGNGPFWPTSNGRLVKNTYSWNREANMLYLDSPAGFGFSYSENASDYFTNDKLTARDNLVFLTHWFNKFPQYRTNDFFITGENYAGHYAPQLAELILQSKVNINLKGIAIGNPLLKFETDFNSATEFLMSHGPISKKTYHMLNNVCNMATLKRQIQSGNFSTNCSKVNLQLSKDLAYTDPFDVSAEFCPQPPEQQAYMLTKQQAGENLDVCVGDETTTYMNRKDVQNAMHAKLVGVKSWSSCSGIVVYDIQSLENSTISILGTLVKSGVRVLVYSGAQDSVIPFLGTQSLIDQLAEDFGFNTTKPDKVWFVGRQVAGSTMEYDDILTYATVIGAGHSVPFSQPERALKLIQTFLKGKSLQNEL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi414g00002 454 SUPERFAMILY alpha/beta-Hydrolases 34 449 IPR029058 -
Vivi414g00002 454 Gene3D alpha/beta hydrolase 22 451 IPR029058 -
Vivi414g00002 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 417 430 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 434 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 FunFam Carboxypeptidase 23 281 - -
Vivi414g00002 454 Pfam Serine carboxypeptidase 37 447 IPR001563 GO:0004185|GO:0006508
Vivi414g00002 454 ProSitePatterns Serine carboxypeptidases, histidine active site. 417 434 IPR033124 GO:0004185
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi414g00002 310 450 Calmodulin-binding Proteins AT2G22960 26.950 1.28e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi414g00002 K16297 - gmx:100805028 530.791