Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi413g00041 ATGTGGCCAGAAGATGTTGAAAAACAGTTCAACATAGAAAAACCAGGAATGGATCAAGATGTGTTGGAAGAAGTAACAATCTTTGAAGAACCAGTTATAGCTGATTTTCAAAGACTCATGGAGCTTACAAACTATACAGATAAAGGGTCATCTCACTTAGCTCGTCTCATGAAACATTGGGAGTATAAGCAAGAAAATGCAGTTCGTCTTCTTCGAGAAGAGCTCGACAACCTTAGCAAACAAAGGGAGGAGGTTGAGCTTATAAAGGAGGAAAGTTACGGTGGAGACCAACGTGTGGTTTTGATATTGGATGATGATGTTCAAAACAAGAGAGTTGAAATTGAGGCTGAGTATGAAACTGTAGGTTACTGGAAACATCGGGCGATCGATTTGGAAAGACGGTTAGAGGCGAGTATTGGGAGAGAGGAGATATTAAAGGAAAAGTTGCAAGAAAATGTAGAGACTATTAAAAGAGAATCCTCACCTGTGGAGGGAGTCTCACAGATTCTTAAGAGAGAAGAAACTTTCCTACATTTTATACTTCAAAATGCACCTCTTGTTATTGGTCATCAGGATAAAGAGTTGCGCTATCGTTTTCTCTATAATCATTTTCCAAGTTTAAAAGAGGAGGACATCATCGGAAAAACGGGGGAAGAAATTTTTTCGGGTTCGGGTGTGAAGGAATCTGAAGATTTTAAGAGAGAAGTAATGGAGAAAGGATTTCCTGCAAAAAGGGAAATAACTTTTGAGACAGAACTATTTGGATCAAAGACATTTTTGATGTATGTAGAACCTGTGTTTAGCAAGGCAGGTGAAACAATTGGAGTAAACTATATTGGAATGCAAGTAACAGATCAGGTGTTAAAAAGAGAAAGAATGGCAAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCAATGGAAACAGAACTTAATAAAACCATTCACATCACAGAGGAGACAATGAGAGCAAAACAATTGCTGGCAACAATGTCTCTAGAGATAAGATCTCCAATTTCTAGTGTTGTTGACATGGCTAAAATTCTTACTACAACAAAACTTGATAGGGAGCAAAAACAGGTATTGGATGCAATAATATCTTCAGGAGATTTGGTTCTTCAACTAATTAATGATTTACTTGATCTTTCCAAGGTTGATCTAGGTTAG 1164 0.3754 MWPEDVEKQFNIEKPGMDQDVLEEVTIFEEPVIADFQRLMELTNYTDKGSSHLARLMKHWEYKQENAVRLLREELDNLSKQREEVELIKEESYGGDQRVVLILDDDVQNKRVEIEAEYETVGYWKHRAIDLERRLEASIGREEILKEKLQENVETIKRESSPVEGVSQILKREETFLHFILQNAPLVIGHQDKELRYRFLYNHFPSLKEEDIIGKTGEEIFSGSGVKESEDFKREVMEKGFPAKREITFETELFGSKTFLMYVEPVFSKAGETIGVNYIGMQVTDQVLKRERMAKLREEIAVQKAMETELNKTIHITEETMRAKQLLATMSLEIRSPISSVVDMAKILTTTKLDREQKQVLDAIISSGDLVLQLINDLLDLSKVDLG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi413g00041 387 Coils Coil 68 91 - -
Vivi413g00041 387 FunFam Putative histidine kinase 5 310 387 - -
Vivi413g00041 387 Pfam His Kinase A (phospho-acceptor) domain 324 385 IPR003661 GO:0000155|GO:0007165
Vivi413g00041 387 FunFam Histidine kinase 5 164 299 - -
Vivi413g00041 387 Coils Coil 132 159 - -
Vivi413g00041 387 Gene3D - 288 385 - -
Vivi413g00041 387 CDD HisKA 324 383 IPR003661 GO:0000155|GO:0007165
Vivi413g00041 387 Gene3D PAS domain 156 287 - -
Vivi413g00041 387 SMART HisKA_10 322 387 IPR003661 GO:0000155|GO:0007165
Vivi413g00041 387 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 313 386 IPR036097 GO:0000155|GO:0007165
Vivi413g00041 387 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 131 385 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi413g00041 1 387 Histidine Kinase Gene Family AT5G10720 62.136 1.93e-169 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi413g00041 - - cam:101512841 606.675