Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi413g00007 ATGGGTTACTATTATTATAATTATTCCATATTGTGTGTTGTTTTGTTTTTATCCATTGAAATTTCTTTGGCTTCTTCAACTGAAGATCAAAAGAGAGATAAGATAACTGAGTTACCAGGGCAACCAAAGAATGTTGGATTTGATCAGTATTCAGGTTATGTAACTGTGAATGAAAAGAATGGAAGAGCACTGTTTTACTGGTTGACTGAAGCACCACTGAGTAGTGAACCCGATTCAAAGCCACTAGTTCTATGGCTTAGTAATGGTGCTGGTTGTTCTGCGATTTCTTACGGTGCTGCCGAAGAAATTGGCCCTTTTCATATTAAGCCTGATGGCAAAACACTTTACTCGAATCCTTATGCTTGGAACAAACTGGCAAATATATTATTCCTTGAGTCTCCTGCTGGCGTTGGTTTTTCTTATTCTAATAAAACATCAGATTTGTACACAGTTGGTGACCAGAAAAACGCTGAGGATTCATATATTTTTCTTGTTAATTGGTTGGAAAGATTTCCTCAGTATAAGCATAGAGAACTCTACATTGGTGGGATAAGTTATGCAGGTCATTATGTTCCTCAATTGGCTCAAATTGTTTACGAGAGAAACAAGGGAATCAATAATCCAGTTATCAATCTTAAGGGATTTTTGGTTGGAAATGGTGTTATTGATGATTATCATGATTTAGTCGGAACATTTGAGTACTGGTGGACACATGGTTTGATTTCAGATTCTACGTATAAACTTCTAGGAACTGCGTGTGACTCTGGATCTTCTTTGCATCCATCAGCGCAATGTACGCAGGCTCGTAAAGTTGCAACTGCTGAGCAAGGAAACATTGATCCATATAGCATTTACTTTCCGCTTTGTAACAATACATCATCGATTAATCGCAGCTTGAATGGTCGTTATCCATGGATGTCTAGAGTAGATGATCCATGTTTCCAAACGTATTCTGATTTGTATTTCAACCGTCCGGAAGTTCAGAAGGCACTCCATGCCAATGTAACAGGGATTCCATATACATGGAAGGGATGCAGTGATATTGTTATGAATAATTGGGCTGATTCGGCATTGTCTGTGCTTCCTATATATCGTGAACTTATCAATGCTAGTCTAAGGATATGGGTATTCAGTGGAGACGCTGATGCTATAGTACCACTAACCGCCACTCGACGTTCTATTAATGCATTGAAGCTTCCAACCATCGTGAATTGGTATCCTTGGTATGACAGTGGCAAGGTTGCTGGATGGAGTCAAGTTTATAAAGGGCTAACATTGGTGACAGTAAGAGGAGCTGGACATAAGGTTGCTTTTCATAAGCCTCGCGAGGCGTTTACTCTTTTTAGATCATATTTGGAGAACAAGAACATGCCATCCTCAAGTTGA 1386 0.3911 MGYYYYNYSILCVVLFLSIEISLASSTEDQKRDKITELPGQPKNVGFDQYSGYVTVNEKNGRALFYWLTEAPLSSEPDSKPLVLWLSNGAGCSAISYGAAEEIGPFHIKPDGKTLYSNPYAWNKLANILFLESPAGVGFSYSNKTSDLYTVGDQKNAEDSYIFLVNWLERFPQYKHRELYIGGISYAGHYVPQLAQIVYERNKGINNPVINLKGFLVGNGVIDDYHDLVGTFEYWWTHGLISDSTYKLLGTACDSGSSLHPSAQCTQARKVATAEQGNIDPYSIYFPLCNNTSSINRSLNGRYPWMSRVDDPCFQTYSDLYFNRPEVQKALHANVTGIPYTWKGCSDIVMNNWADSALSVLPIYRELINASLRIWVFSGDADAIVPLTATRRSINALKLPTIVNWYPWYDSGKVAGWSQVYKGLTLVTVRGAGHKVAFHKPREAFTLFRSYLENKNMPSSS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi413g00007 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 441 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 FunFam Carboxypeptidase 360 454 - -
Vivi413g00007 461 Pfam Serine carboxypeptidase 39 454 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 FunFam Carboxypeptidase 29 291 - -
Vivi413g00007 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Vivi413g00007 461 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
Vivi413g00007 461 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Vivi413g00007 461 Gene3D - 360 453 - -
Vivi413g00007 461 Gene3D - 313 349 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi413g00007 323 455 Calmodulin-binding Proteins AT2G22960 29.851 1.06e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi413g00007 K16297 - gmx:100805722 747.273