Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi411g00015 ATGGATTGCCGAATTGAAACCGCAGAAACTCGCAGGAACAAGTGTGCAGCATGCTATAGGCAGTTCAACAGAGTGGAGCATCTAGTGGATCACATGAAGATCTCTTATCATTCTGTTCATGAACCAACCTGTGGTATTTGCAGGAAACATTGCAGATCCTTTGAGTCTCTAAGGGAACATCTTATAGGTCCATTGCCAAAACCAGAATGCAAAGAAATCTTTGCTAATCGAGGGTGCAAGTTTTGCTTGAAAGTCTTTGATAGCCCTAACTCTCGTAGGATCCATCAACAAAAGTGTCAACTCTCTGGATTAAGTGGAATATGTGGCCGATTTTCAAACTTGGGAATTCGGGATAACTTGACAATTGGTGGGGGAAGAGGACCACAAGTAGTTGCACTAGCTTGTAAAATGGTGGGAGGTGGAAGTGATGGTTCACTTGATCTTTGTGCAAGAGTTTGCTTAATAGATGAACATGAGAATATTATCTTCCATTCTTATGTTACTCCACCAATTCCAATCACAAACTACAGGTATGAGACAACTGGTATTAGACATGAATACTTAAGAGATGCAATGCCATTGAAACTAGTTCAAAGGAAGATTCAAGATTTTCTTTGTAATGGAGAACCCATTTGGACAATTCGTTCAAAGGGAGGAAAAGCTAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCATCTTTGCAAATTGATTATCCAACACCAAAAATAAGGGACACTGCAAAATATCCTCCACTCATGAAAACTAGCAAGCTCAGCAACTCACTCAAATACCTAACACAAGCATATCTTGGGTATGATATTCAAACTGGAATACAAGATCCTTATGATGATTGTGTTGCAGCAATGAGACTCTACATGAGAATGAGAACACAGATGCACAAAACAGAAGATTACCCTTTGGCATCTGATCCTCAAAACAGGAATAACTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTAGAATTCTCAAGGTCTGATTACTACTGCTGGTGCTTGGATCCATGA 1053 0.4008 MDCRIETAETRRNKCAACYRQFNRVEHLVDHMKISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKPECKEIFANRGCKFCLKVFDSPNSRRIHQQKCQLSGLSGICGRFSNLGIRDNLTIGGGRGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVTPPIPITNYRYETTGIRHEYLRDAMPLKLVQRKIQDFLCNGEPIWTIRSKGGKARILVGHGLDHDLASLQIDYPTPKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYDDCVAAMRLYMRMRTQMHKTEDYPLASDPQNRNNFASWRQSELERMSPEQMLEFSRSDYYCWCLDP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi411g00015 350 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Vivi411g00015 350 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 17 344 IPR047021 GO:0004527
Vivi411g00015 350 CDD REX4_like 131 294 IPR037431 GO:0006364|GO:0008408
Vivi411g00015 350 FunFam RNA exonuclease 4 126 313 - -
Vivi411g00015 350 Gene3D - 128 313 IPR036397 GO:0003676
Vivi411g00015 350 Pfam Exonuclease 149 293 IPR013520 -
Vivi411g00015 350 SUPERFAMILY Ribonuclease H-like 143 301 IPR012337 -
Vivi411g00015 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Vivi411g00015 350 SMART exoiiiendus 129 303 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi411g00015 1 349 C2H2 Transcription Factor Family AT3G27970 73.164 0.0 555