Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi40g00020 ATGGCAGCTCGCTCACTTTCCCGTTTGCTCTCTCGCTCTCTATCTTCTTCTTCTGGAGCTGCTGGTTCTCTGCTTCGCTCACCACTAGGGAGAAAATCTGAAGGATGGAGAAATATAAACAGATTTAGCACTGCTGCAGCTGTTGAGGAATTGATTACTCCTCAAGTTCCAATCAATTATACACAGCTTCTCATAAATGGAAAATTTGTAGATGCTGCATCAGGGAAAACATTTCCAACTTATGACCCGCGCACAGGAGAAGTGATTTCTCAGGTAGCTGAAGGCGATGCTGAAGATATCAATCGTGCAGTAGCAGCAGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGACTGCTTATGAAAGAAGTCGTATATTGTTGCGCTTTGCTGATTTGGTTGAGAAGCATAATGACGAGATTGCAGCTCTGGAGACATGGAACAGTGGAAAGCTTTATGATCAGGCTGCCAAGACTGAAGTACCTATGTTTGTGCGTTTCTTTCGCTATTATGCGGGGTGGGCAGATAAAATTCATGGGTTGACAGTCCCAGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATTCCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCACTAGCATGTGGTAATACCGTTGTTCTCAAGACTTCTGAGCAAACACCGCTAACGGCTCTCATCGTGGCAAAACTACTTCATGAGGCTGGTCTTCCCCCAGGTGTTCTCAATATAGTTTCTGGCTATGGTCCAATTGCTGGTGCACCTCTTGCAAGTCATATGGGTGTGGATAAGTTAGCATTCACGGGATCGACGGATACTGGAAAAACTATACTTCAGCTGGCTGCAAGAAGCAATCTTAAGCCTGTGACATTGGAACTTGGAGGAAAATCACCTTTCATTATTTGTGAAGACGCTGATGTTGACGAGGCTGTTGAAATTGCACACTTTGGTCTATTTTTTAATCAGGGGCAATCTTGTTGTGCTGGATCCCGTACCTTTGTACACGAGCGTATCTATGACGAGTTCTTGGAGAAAGCAAAGGCGCGGGCTTTGAGACGTGTAGTTGGTGATCCATTTAAGGAGGGTGTAGAACAAGGTCCTCAGATTGATTCGAAACAATTTGAGAAAGTACTTAGGTACATAAAGTCTGGAATTGATAGCAATGCTACTCTTGAATGTGGAGGTGGGAGATTTGGTTCAAAAGGTTTCTTTGTCCAACCAACAGTATTCTCAAATGTTCAGGATGATATGCTGATAGCAACAGATGAAATCTTTGGGCCAGTTCAGTCCATCTTGAAGTTCAAGGACATTGATGAAGTGATACGACGGGCAAATGCGACGCGTTATGGTTTAGCGGCAGGTGTTTTCACAAAAAATTTGAGCACAGCCAACACGTTGATGCGGGCACTTAGAGCTGGAACAGTGTGGATTAATTGCTATGATGTTTTTGATGCTTCAATTCCTTTTGGTGGTTACAAGATGAGTGGGAATGGTAGGGAGATGGGACTCTATAGTCTTAACAACTATCTGCAGGTAAAAGCTGTGGTGTCTCCAGTGAAGAATCCTGCGTGGTTGTAG 1626 0.4391 MAARSLSRLLSRSLSSSSGAAGSLLRSPLGRKSEGWRNINRFSTAAAVEELITPQVPINYTQLLINGKFVDAASGKTFPTYDPRTGEVISQVAEGDAEDINRAVAAAREAFDNGPWPKMTAYERSRILLRFADLVEKHNDEIAALETWNSGKLYDQAAKTEVPMFVRFFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTSEQTPLTALIVAKLLHEAGLPPGVLNIVSGYGPIAGAPLASHMGVDKLAFTGSTDTGKTILQLAARSNLKPVTLELGGKSPFIICEDADVDEAVEIAHFGLFFNQGQSCCAGSRTFVHERIYDEFLEKAKARALRRVVGDPFKEGVEQGPQIDSKQFEKVLRYIKSGIDSNATLECGGGRFGSKGFFVQPTVFSNVQDDMLIATDEIFGPVQSILKFKDIDEVIRRANATRYGLAAGVFTKNLSTANTLMRALRAGTVWINCYDVFDASIPFGGYKMSGNGREMGLYSLNNYLQVKAVVSPVKNPAWL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi40g00020 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620
Vivi40g00020 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 531 IPR016162 GO:0016491
Vivi40g00020 541 Pfam Aldehyde dehydrogenase family 69 531 IPR015590 GO:0016491
Vivi40g00020 541 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 307 314 IPR029510 GO:0016491
Vivi40g00020 541 SUPERFAMILY ALDH-like 56 534 IPR016161 GO:0016491
Vivi40g00020 541 CDD ALDH_F2BC 58 532 - -
Vivi40g00020 541 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 335 346 IPR016160 GO:0016491
Vivi40g00020 541 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 46 531 - -
Vivi40g00020 541 FunFam Mitochondrial aldehyde dehydrogenase 2 313 502 - -
Vivi40g00020 541 FunFam Aldehyde dehydrogenase, putative 503 529 - -
Vivi40g00020 541 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 65 323 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi40g00020 1 541 Aldehyde Dehydrogenase Gene Family AT3G48000 76.384 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi40g00020 K00128 - gmx:100811501 913.294