Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi408g00007 ATGATTTCTAAGACTCTTACTTATGTGAAAGCTATGTGGTGTTTTAATTGCTTTGGGTTTTTCAAGAGACGGAATCCTCAGAAGGATAAGCCTGCTGCCATCTACAATAGTAATCTCTCCCGGGAGCTGTTGTTGGATGATGATGATGATTTTGATGACGAAAGGTCTTTCTGTAATGATGAGGTTACTAGCACCACCAGTGGAGATGATAGTGAGGAGCAAAATCGTCCCAAGCGATCGGAGGATATTTTGGTTTTTAGAGTAGAGAATGGTATGATTTGTAGACAGTTTCCTGTAAAAGAGACTGACAAAGTTTTTCGCACAGAGGATGAAGATGGAAACAAGATGATAAATGAGTATGTTCGTGAGTATAAAATTGGTTCGGGTAGCTATGGGAAAGTGTCTCTTCATCGAAGCTCGGCTGATGGAAAACATTACGCAATTAAGGCCTTTCATAAATCTCATTTACGGAAGCTTCGAGTTGGACCCTCAGAAACTGCCATGACTGATGTTTTACGCGAGGTTTTCATTATGAAAATGATCCAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCGGATCACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGCGAGGGTTCAGGTCGAGCTTGTAGCTTAGGTGAAGAGACTGCTAGGAGATACCTGCGGGATATCGTTTCTGGATTAATGTATCTCCATGCTCATAATATAGTTCACGGGGATATCAAGCCTGACAATTTGTTGATTACTCGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGTGCTTCGACGATCACCTGGAACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTCTTACCTACCGAGGTAAAGCCTCGGATACATGGGCTGTAGGAATTACTTTATACTGTATGATATTGGGCGAATACCCTTTTCTTGGTGACACACTTCAGGATACTTATGACAGAATAGTCAATAATCCAATAGTGCTCCCAAATGATCTGAATCCGCGGTTGAAAAACTTAATTGAAGGACTTCTTTCCAAAGACCCAAGTCAAAGGATGACATTGGCTGAAGTCGCCGCTGATAGCTGGGTTATTGGAAATGATGGGCCAATTCCCGAATACCCGTGTTGGTGCAAAAGGAATGAACTTGGAGAGGAAAGACAGTGA 1218 0.4171 MISKTLTYVKAMWCFNCFGFFKRRNPQKDKPAAIYNSNLSRELLLDDDDDFDDERSFCNDEVTSTTSGDDSEEQNRPKRSEDILVFRVENGMICRQFPVKETDKVFRTEDEDGNKMINEYVREYKIGSGSYGKVSLHRSSADGKHYAIKAFHKSHLRKLRVGPSETAMTDVLREVFIMKMIQHPNIVNLIEVIDDPESDHFYMVLEYVEDKWVCEGSGRACSLGEETARRYLRDIVSGLMYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDVLRRSPGTPVFTAPECILGLTYRGKASDTWAVGITLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPNDLNPRLKNLIEGLLSKDPSQRMTLAEVAADSWVIGNDGPIPEYPCWCKRNELGEERQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi408g00007 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Vivi408g00007 405 Gene3D Phosphorylase Kinase; domain 1 114 216 - -
Vivi408g00007 405 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi408g00007 405 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 75 383 - -
Vivi408g00007 405 SUPERFAMILY Protein kinase-like (PK-like) 110 392 IPR011009 -
Vivi408g00007 405 CDD STKc_LKB1_CaMKK 126 381 - -
Vivi408g00007 405 Pfam Protein kinase domain 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi408g00007 405 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi408g00007 405 Gene3D Transferase(Phosphotransferase) domain 1 218 387 - -
Vivi408g00007 405 FunFam Serine/threonine-protein kinase Ssp1 114 216 - -
Vivi408g00007 405 MobiDBLite consensus disorder prediction 59 80 - -
Vivi408g00007 405 FunFam Serine/threonine-protein kinase GRIK2 110 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi408g00007 115 388 CBL-interacting serine-threonine protein kinases AT5G35410 31.387 5.06e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Vivi408g00007 Pkinase 5.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi408g00007 K00908 - gmx:100789178 620.928