Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi407g00005 ATGGCTTTAGCCATTTCATCCACTTCATTATCATCAAGTTTTCCAAACAGAGAAATATGTCAAAAGGTTTTACACCAAGGAACTACAACAACTTCATGGTTAAGTAGAAGAAGAACACTTACGATTAGAAATGCGAAAAAAGGTGTGTCGGATTTGTGTGTACCACTTCCTCCAGATAGGCCTCTGTGGTTTCCAGGTAGTTCAGCTCCTGAATGGCTTGATGGCAGTCTTCCTGGTGATTTTGGTTTTGACCCTCTTGGATTAGGCTCTGATCCAGAGTTACTAAAATGGTTTGCACAAGCAGAACTAGTTCACGGAAGATGGGCGATGTTAGGAGTATCAGGAATCCTAATCCCCGAAATACTCGAAGGAATGGGCTACATAAAAAACTACTCATGGTACACTGCAGGTTCAGTACACTATTTCGCAGACCCAATAACACTCTTCATTGTTCAACTAGCTTTAATGGGCTGGGTTGAAGGTAGAAGATGGGCCGATATCGTCAACCCGGGTAGCGTTGATATCGAGCCCAAGTTTCCAAATAGGCCTAACCCGAAACCAGATGTTGGTTATCCCGGCGGGCTTTGGTTTGATTTTATGCAGTGGGGAAGAGGGTCTCCTGAGCCCGTTATGGTTTTGAGGACTAAAGAGATTAAGAATGGAAGACTTGCTATGCTTGCTTTTGTCGGGTTTTGTTTTCAAGCTGTTTATGTTGGAGATAGTCCTATTCAGAATTTGATGGCTCATCTTGCTGATCCCGGTCATTGCAACATTTTCTCGGCTTTCACTTCAAGGTAG 798 0.4336 MALAISSTSLSSSFPNREICQKVLHQGTTTTSWLSRRRTLTIRNAKKGVSDLCVPLPPDRPLWFPGSSAPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELVHGRWAMLGVSGILIPEILEGMGYIKNYSWYTAGSVHYFADPITLFIVQLALMGWVEGRRWADIVNPGSVDIEPKFPNRPNPKPDVGYPGGLWFDFMQWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYVGDSPIQNLMAHLADPGHCNIFSAFTSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi407g00005 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 263 IPR001344 GO:0009765|GO:0016020
Vivi407g00005 265 FunFam Chlorophyll a-b binding protein, chloroplastic 70 255 - -
Vivi407g00005 265 SUPERFAMILY Chlorophyll a-b binding protein 59 264 - -
Vivi407g00005 265 Gene3D Chlorophyll a/b binding protein domain 70 255 - -
Vivi407g00005 265 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi407g00005 53 265 Chloroplast and Mitochondria Gene Families AT3G61470 65.258 6.27e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi407g00005 K08908 - qsa:O6P43_002643 421.779