Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi407g00001 ATGTCTACCTCATCGGAGCTCTCGGAAGTTTCCGGCCACAAACCGGCGAGGTCGCCGGAGAAGACTACTTTCTCTCAGACTTGCAGTTTACTGAGTCAGTATATCAAGGAGAAGGGGAGCTTCAAAGATCTTTCCCTCGGTATGTCATGCAACAACAACAACACCGAAACTACTGGGTGTGTTGAGAGTTCTTCTCAATTAGGAACAACTATGAACTTGTTTCCAACTATGGAAAATAACTTGGGACCAAAGAATCTTACTACCATGGATTTGTTCTCTCCACAAGCTTCCATGAACAACTCCAATGCTAATAAGGGACCTAAAGCTGCACAATTGACAATGTTTTACAATGGCCAAGTAATTGTATTCAACGATTTCCCTGCTGATAAAGCACAAGAGCTCATGGCTTTTGCTAACAAAGGAATCTCTGAAAGTCAGAACAACAATTCTTTGTACACTTACTCACAAAGCCAGCCTTCATTTCCTCCAAATTCGGTCAGAACTTCTGTTGATCCGATCGCTCCAATTGTTCCAACAGTGAACAACATCGTCCCTAGCACCTGCAACGGGCCGATTCTTGAACACCCTCAAGTTCTTTCCAGACCTAATGTTTGCGATCTTCCAATTATGAGGAAAGCTTCTCTTCATCGGTTCCTTGAGAAGAGAAAGGATAGAGTTGCTTCCAAATCACCATATCAAAGAACAAATGCAATGGAGAGTATTAACAAGCCTGGTGAAAACATGTCATGGCTTGTGGGTGCAAAATCAACTCAAATCTGA 780 0.4269 MSTSSELSEVSGHKPARSPEKTTFSQTCSLLSQYIKEKGSFKDLSLGMSCNNNNTETTGCVESSSQLGTTMNLFPTMENNLGPKNLTTMDLFSPQASMNNSNANKGPKAAQLTMFYNGQVIVFNDFPADKAQELMAFANKGISESQNNNSLYTYSQSQPSFPPNSVRTSVDPIAPIVPTVNNIVPSTCNGPILEHPQVLSRPNVCDLPIMRKASLHRFLEKRKDRVASKSPYQRTNAMESINKPGENMSWLVGAKSTQI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi407g00001 259 Pfam Jas motif 208 233 IPR018467 -
Vivi407g00001 259 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 238 IPR040390 -
Vivi407g00001 259 ProSiteProfiles Tify domain profile. 105 140 IPR010399 -
Vivi407g00001 259 MobiDBLite consensus disorder prediction 1 23 - -
Vivi407g00001 259 Pfam tify domain 107 139 IPR010399 -
Vivi407g00001 259 SMART tify_2 105 140 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi407g00001 1 251 Tify Gene Family AT1G19180 39.338 7.66e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi407g00001 tify 2.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi407g00001 K13464 - gmx:100801449 295.819