Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi403g00028 ATGGAACAGTTACTAGTTCAATGCGCCAACGCCATTGAAACCAACAATGCAACACAAGCACAACAAATCCTTTGGGTCCTTAACAACACAACACCCCAAGAAGGTGACTCCAATCAACGCTTAGCCGCAAGCTTCATTCGAGCTCTAACAACCCGAGCCTCCAAAACCAGTAGCTGCAAAATGCTAGAAGAACAACTTACAGAAACTCCAAACACAAACAGTTATAACAATCTTGACAATAACAACAACCTCTCTATACAAACACACAAATTCTCCGTCATTGAACTAGCCAGCTTCGTCGATTTAACACCGTGGCATCGCTTCGGTTACACAGCAGCAAACTCCGCGATTCTAGAAGCCACCAAAGGTTTTTCTGTCATTCACATTGTTGATTTGAGTTTAACTCATTGCATGCAGATTCCTACACTAATCGACGCGATTGCTAATCGCGACGATGTTCCTCCTTCAATCAAGCTCACAGTTGCAGTTAGGAATAGGAATAGTATTCATATTCCAATTCCACCTTTGCTCGATCTTTCTTACGACGAATTAGGTTCCAAACTGGTTAATTTTGCTAAGTCAAGAAACGTGAGTATGGAATTCAAAGCAGTTTCTTCTACTTACGCAGACGGATTCGCTTCTTTGATCGAATATCTACGAGTGCAAGTCCAAGATTTAGTTTATAACAAAACTCATGAAGCATTGGTAATAAACTGTCATATGATGCTTCATTATATTCCTGAAGAAACTCTATATACAAATATGAATATGAATACTAAATCTTCTTCGCTACGATCGATGTTTCTAGAAGCTCTCCGAGGTTTAGAACCGACGATTGTCATTCTGGTCGATGAAGATGCGGATTTAACCTCGAGTGATTTAGTGACTAGATTAAGGTCAGCATTTAACTATCTTTGGATTCCTTTCGACACGGTGGACACGTTTCTACCGCGAGGGAGTAAACAAAGGCATTGGTATGAATCAGATGTTTGTTGGAAGATTGAGAATGTGATAGCATATGAAGGGGTTCAAAGAGTTGAGAGAGTTGAGGATAAAAGCAAGTGGGAGCAAAGAATGAGAAATGCGCATTTTCAAGGGGTTTGTTTTAGTGAAGATACGGTTATGGAGGTTAAGGGGATGATTGATGAACATGCAGTTGGGTGGGGATTGAAGAAAGAAGATGAGTTTCTTTTGCTTACTTGGAAAGGACACAATGTTATCTTTGCTTCTGCTTGGTTACCTTCTTGA 1248 0.403 MEQLLVQCANAIETNNATQAQQILWVLNNTTPQEGDSNQRLAASFIRALTTRASKTSSCKMLEEQLTETPNTNSYNNLDNNNNLSIQTHKFSVIELASFVDLTPWHRFGYTAANSAILEATKGFSVIHIVDLSLTHCMQIPTLIDAIANRDDVPPSIKLTVAVRNRNSIHIPIPPLLDLSYDELGSKLVNFAKSRNVSMEFKAVSSTYADGFASLIEYLRVQVQDLVYNKTHEALVINCHMMLHYIPEETLYTNMNMNTKSSSLRSMFLEALRGLEPTIVILVDEDADLTSSDLVTRLRSAFNYLWIPFDTVDTFLPRGSKQRHWYESDVCWKIENVIAYEGVQRVERVEDKSKWEQRMRNAHFQGVCFSEDTVMEVKGMIDEHAVGWGLKKEDEFLLLTWKGHNVIFASAWLPS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi403g00028 415 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 402 IPR005202 -
Vivi403g00028 415 Pfam GRAS domain family 1 412 IPR005202 -
Vivi403g00028 415 ProSiteProfiles GRAS family profile. 1 413 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi403g00028 1 414 GRAS Transcription Factor Family AT3G49950 56.115 1.51e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi403g00028 GRAS 1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi403g00028 - - vvo:131650176 798.119