Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi403g00026 ATGAGTTGTAACGGTTGCCGTGTCCTTCGAAAGGGTTGTAGCGAGTCTTGTATCTTACGCCCTTGTATTCAATGGATCGATACCCCTGAATCACAAGGCTATGCCACTGTCTTTGTTGCCAAGTTTTTCGGGCGCGCTGACCTCATGTCTTTCATTTCCAACGTCCCTCAACCACAAAGACCCGCTTTGTTTCAATCTCTGTTGTTTGAAGCGTGTGGACGAACGGTTAACCCCGTTAACGGTGCCGTTGGACTTTTATGGACAGGAAACTGGCACGTCTGTCAAGCGGCAGTTGAAACCGTTCTCCGCGGCGGAACCCTTGGGCCTATACCTGAGCTTCTCGGTTTAGATGAGTCCTCCGAAGGGGAAGTCACGTGTAACGACGCGCGGAAGATCCGAGATCCGAACTCGAGTTTCCGGTTTACGAGTTCCGGTGGTAAACGCAAGCGATTGAGTGAAACTGCGAAGATTCAGACGACGGCGACGACTGATCTTAATCTCCGATTGACGCCGTGTTTTCTTCAGAACGCGTTGACCAACCGGAGGGAGGTTCACCGGCAGGGATCACCGTCGTTGAATTCTGAGGAATCTGTGACGACGACGACGTGGTTGGATAGTGGAAACGGAGATGATTACGTTCACGACGGAGACCGGAAAGTTCTTAACCTTTTTGTTTGA 678 0.5103 MSCNGCRVLRKGCSESCILRPCIQWIDTPESQGYATVFVAKFFGRADLMSFISNVPQPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLGPIPELLGLDESSEGEVTCNDARKIRDPNSSFRFTSSGGKRKRLSETAKIQTTATTDLNLRLTPCFLQNALTNRREVHRQGSPSLNSEESVTTTTWLDSGNGDDYVHDGDRKVLNLFV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi403g00026 225 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Vivi403g00026 225 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Vivi403g00026 225 MobiDBLite consensus disorder prediction 183 207 - -
Vivi403g00026 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 203 - -
Vivi403g00026 225 MobiDBLite consensus disorder prediction 183 209 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi403g00026 1 225 AS2 family AT3G49940 54.054 5.26e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi403g00026 LOB 3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi403g00026 - - vvo:131646923 394.43