Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi403g00011 ATGAAACTTCATAATTCAACCTTCAATATCATAATCTTCATCTTCATCTTCTTCTTCACACTCTCTGTATCAATCAAACTCAACACTACAAAAAATGAATCCGATCATCACAGGAGGATCCTCCATCAACCATTATTCCCGGCGACTTCAGCTCCACCACCAACCCCCACCGTCACACCACCACCACCTTCTCCCAACAACATTCCATTCTTCCATGAATATCCAGAAGGACCACCGTCGAATCAGAATCAAGCAGCACCGGTAACAACAACACCAAACGCTTCAACGGCGAATCCAACAGCAACACAGCCAGCAAAAGGAACGAAAAAGGTTGCCATTGTGATCTCCGTTGGAATTGTGACGCTTGGAATGTTGTCGGCGTTGGCTTTCTTTTTATACAAACACAGAGCAAAACACCCTGCGGATACACAGAAGCTAGTGAGTGATAGCACACAGAGGAACAATAATCAACATGATTCAAATTCAGCAGCTCCGGTACCGTCGAGTTTTCTCTATATTGGGACTGTGGAACCTTCCAGAAGGTCAACGACGGTCAACGATCCCAGAGAAACAGAAAAGCCTAACCGTTCGCCGTATCATAAACTGAATTCCGTTAAGCGATCCGATCGGTATCGACCGAGTCCTGAATTGCAGCCAATGCCGCCGTTAAGTAAGCCTCATGCCGACGGAAACATCCCGCCGGCGATGTCTCCGTCTTCTTCCGATGAGGAAAGTAACGAGACAGCGTTTCATTCGCCGCAGAACTCGTCGGTAAGTCAAGAAGACGGATTTTACACGCCGGTTACGCGTCTCTTTAACGGTAACTCTGTGAAGAGAGATAATCATTCGACGGTTACGCCTCTTCCGTTATCGAAGAGAACTTCACCGAAATCTCGTCTCTCTGCTGCGTCGCCGGATATACGACACGTCATCATACCGTCTATCAAACAGACTCCAAATCCGCCACGTCATCTACCAGAAAAACAGTTAACCGCCGGAGGAGGACATTCAAGGAAGCCGAAATTCTCAGCACCGCCACCACCTCCGAATTTGGCGCATCTTCAATCAACAACTAATACATTTTCTTCACTTAAACCTCTATCTACTCCTGCTCCTCCACCACCACCACCACCACCGCCACCAGCTCCTGCTCCTCCGCCACCACCTCCACCACCACCAATGATTCGAAAGTCATTGTCGCCGCCGACGGTTTCAGCATCTTCTGCATCTCTAAAGAGGTTAAGCGTAGGGGATGATTCAGCTTTTAGTGTAACAAAAAGTTCAGAGTCTGTTTCAGATCATGTTGATAATATTAATGGTGAGAGTGTGAGATCTTCTTCTGAGAGGTTTGAAGGTGAAGCTAATGAAACGGAAAGTGGAAAACCGAAGTTGAAAGCTTTGCATTGGGATAAAGTTCGAGCTACTTCAGATCGTGCTACCGTGTGGGACCAAATAAAATCAAGTTCATTTCAATTAAATGAGGATATGATGGAGTCCTTGTTTGGCTGCAACAATACAGTGAATTCTGCTCCAAAACCGAAAGAACAAGGGGTTAGAAAATCAGTTCTTCCCTCTCTTGATCATGAGAACAAGGTGTTAGATCCTAAGAAGTCACAGAACATAGCTATACTTCTAAGGGCACTGAATGTGACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAATTGAAAAACTTTAACGGCGATCTCTCAAAACTTGGATCTGCAGAGAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCATGCTATACAGAGCCAGTTTTGATTCAGAAATCAACTACCTCAAGAAGTCTTTCCAAACCCTTGAGGCAGCAAGTGAGGAATTAAGGAACAGTCGGTTATTCTTCAAACTCCTTGAAGCTGTCCTCAGGACAGGAAACAGAATGAATGTCGGCACTAATCGAGGTGACGCTAAAGCTTTCAAACTCGACACACTCCTAAAACTCGCAGATATAAAGGGAACAGATGGAAAAACCACATTACTCCACTTTGTTGTCCAAGAGATCATTAGATCTGAAGGTGCAGAAACTGAATCTGCAAACAGAAATATTCCCGAACAAATGGAGTCCAAATTTAACGAGGAGCAGTTTAAGAAGAAAGGATTGCATGTTGTGGCTGGTCTCAGTAAAGACCTTGATAGTGTCAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGTGGCTACGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGGTTTGTTTTGCAATATGAAAAGCCAGATATGAGAGGCAAATTCTTTAATTCCACGAAGCTCTTTTTGAAATATGCAGAAGATGAAATTGTGAAAATTAAGGCTCATGAGAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGGAATGCAGCAAAAGAAGAAGCACACCCTTTAAGAATTTTCATGATTGTGAGAGATTTTCTAAACATTTTGGATTTGGTTTGCAAAGAAGTGGGAAGGATGCATGATAGAATCGTCGGCGGAGCTTCAAGATCCTTCAGAATAGCTTCAAATGCACCGTTACCGGTTCTTAACAGGTACAATGGGAAACAAGATAGAAGCTCAGATGAGGAAAGCTCATCATCCCCTTAA 2724 0.4372 MKLHNSTFNIIIFIFIFFFTLSVSIKLNTTKNESDHHRRILHQPLFPATSAPPPTPTVTPPPPSPNNIPFFHEYPEGPPSNQNQAAPVTTTPNASTANPTATQPAKGTKKVAIVISVGIVTLGMLSALAFFLYKHRAKHPADTQKLVSDSTQRNNNQHDSNSAAPVPSSFLYIGTVEPSRRSTTVNDPRETEKPNRSPYHKLNSVKRSDRYRPSPELQPMPPLSKPHADGNIPPAMSPSSSDEESNETAFHSPQNSSVSQEDGFYTPVTRLFNGNSVKRDNHSTVTPLPLSKRTSPKSRLSAASPDIRHVIIPSIKQTPNPPRHLPEKQLTAGGGHSRKPKFSAPPPPPNLAHLQSTTNTFSSLKPLSTPAPPPPPPPPPPAPAPPPPPPPPPMIRKSLSPPTVSASSASLKRLSVGDDSAFSVTKSSESVSDHVDNINGESVRSSSERFEGEANETESGKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCNNTVNSAPKPKEQGVRKSVLPSLDHENKVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNFNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRASFDSEINYLKKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGAETESANRNIPEQMESKFNEEQFKKKGLHVVAGLSKDLDSVKKAAGMDSDVLSGYVTKLETGLEKVRFVLQYEKPDMRGKFFNSTKLFLKYAEDEIVKIKAHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGASRSFRIASNAPLPVLNRYNGKQDRSSDEESSSSP 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi403g00011 907 MobiDBLite consensus disorder prediction 45 108 - -
Vivi403g00011 907 SUPERFAMILY Formin homology 2 domain (FH2 domain) 383 865 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 367 398 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 183 213 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 424 445 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 47 69 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 77 105 - -
Vivi403g00011 907 ProSiteProfiles Formin homology-2 (FH2) domain profile. 454 881 IPR015425 -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 143 410 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 888 907 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 424 462 - -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 234 301 - -
Vivi403g00011 907 PANTHER FORMIN-RELATED 15 900 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi403g00011 907 MobiDBLite consensus disorder prediction 446 462 - -
Vivi403g00011 907 Gene3D Formin, FH2 domain 463 873 IPR042201 -
Vivi403g00011 907 SMART it6_source 454 870 IPR015425 -
Vivi403g00011 907 MobiDBLite consensus disorder prediction 144 168 - -
Vivi403g00011 907 Pfam Formin Homology 2 Domain 456 855 IPR015425 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi403g00011 34 896 FH2 protein (formin) Gene Family AT5G67470 56.354 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi403g00011 - - gmx:100798670 1096.65