Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07995 ATGAAAAACACCGACCATTATGATTCGTACGACTATCGATGCCGTGACAGTGGTACATCTGATTCTGAATCCGACAATGGTCGGGATGACAGTAATTCGGTGTCCAGTGCGTACCAAGGTTCAAGTGATGGTGATGGCGATGGCGATGGTGATAGTCACGGTGAAAAATTTGTTGAATTTGATGCAGTTGTAGGTGATAGAACAGTGAAAATTAATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATGTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGACAAGATCGACTGAGGATGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACACGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGATATTTATGTAGTGACATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTGTCCACTTACACCCCATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAAATTGACGGTCTACAGTCAAATGGAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTAATATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAACTGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGACATGGATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGCGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGCTGCGTTGGTGTCAGATGAAACGACAGAGACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAGATACCCAGCAGCAGTTGTAACAGACGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGTCTGAGAATGTAAAGAACTCGGCATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATCAATTTGAAGAGTTTTGGTCAAAAATAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTGCAAAAACGTACGAGAACAGGTCACTATGGGCAACTGCATATCTACGTAAGAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCAGTCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATCTTATAGAAACAATGAACTGATTGCCGATTATAAATCAAAGTTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAATGTTTATACTATGGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAAGTTAATTCGCAACGGATTTAAGACTTATCGATTTACAAAATATTGTTGTGATAACTATGACGTAGAGGTTGTGTAA 1764 0.3957 MKNTDHYDSYDYRCRDSGTSDSESDNGRDDSNSVSSAYQGSSDGDGDGDGDSHGEKFVEFDAVVGDRTVKINALTADEIRAMEFGTVDEANVFYFKYAKCKGFAIRKSDVRTRSTEDGQTIIMRQFVCNKHGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKDIYVVTCFEEAHNHELTPSRFVHLHPIYREITAADRAQIDGLQSNGIRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRANIKDGDVAAAINYLTVKSSTDPMLYGKYAVDMDGRMKSLFWADGSSRSDYFCFGDVIAFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGAALVSDETTETYKWLLECFLECMENRYPAAVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNASENVKNSAFLKDFQKAMYSNFTKDQFEEFWSKIIKENGLEGNPWVAKTYENRSLWATAYLRKKFFGRIRTTSQCEAVNAVIKSYVRKKGCIFEFMHNFDQAMRSYRNNELIADYKSKFSEPVMTTQLRALESHAANVYTMEIFKEVRDEIVKAGSLIVKEKLIRNGFKTYRFTKYCCDNYDVEVV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07995 587 Pfam FAR1 DNA-binding domain 93 185 IPR004330 -
Vivi3g07995 587 PANTHER OS01G0519700 PROTEIN 79 575 - -
Vivi3g07995 587 MobiDBLite consensus disorder prediction 1 52 - -
Vivi3g07995 587 MobiDBLite consensus disorder prediction 1 28 - -
Vivi3g07995 587 Pfam MULE transposase domain 307 401 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07995 Vivi-Chr3 217774618 217776919 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07995 MULE 5.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07995 - - vvo:131620026 1107.43