Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07944 ATGATATATATTGTGGCTTGTGGCTGGGAGCTATTTTTTCTCTCCGAGTTTGGGGCACGTCCTCTCGGTGGTGGGACGGAATATTACAGAGGTTTTCATCAAAGAATTAGGCCAACCCAAATGGGGTTTTCCTTAAACATAGATGTAGCTTCAAGAGCTTTTTATGAACCAATTCTTGTCACTGAATTTATTTCCAAACATTTTAATTTGGATTTGTCAAGGCCAAGGGCACTGTCTGATCAAGATCGAGTAAAGATTGAGAAAGTCTTGAAAGGTGTTAAGGTAAAACTATCTATCTCTTGGTGGGGAAATAAGGAGGTGCAAGGTGACCGGTCTCTCAAGAGAGCCGCTTGGAGTCCTAACATTTTATTAAGCATAAACTATTTATACCGTCGAAGGAGGCAAAACAGGGGCATCAACAAGCGCTAG 429 0.4149 MIYIVACGWELFFLSEFGARPLGGGTEYYRGFHQRIRPTQMGFSLNIDVASRAFYEPILVTEFISKHFNLDLSRPRALSDQDRVKIEKVLKGVKVKLSISWWGNKEVQGDRSLKRAAWSPNILLSINYLYRRRRQNRGINKR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07944 142 Pfam Argonaute linker 1 domain 12 56 IPR014811 -
Vivi3g07944 142 SUPERFAMILY PAZ domain 22 108 IPR036085 GO:0005515
Vivi3g07944 142 Gene3D paz domain 52 121 - -
Vivi3g07944 142 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 17 98 - -
Vivi3g07944 142 SMART DUF1785_2 5 57 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07944 Vivi-Chr3 217039455 217043282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07944 12 98 Eukaryotic Initiation Factors Gene Family AT1G48410 52.273 3.14e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07944 K11593 - vvo:131593579 251.521