Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07943 ATGATATATATTGTGGCTTGTGGCTGGGAGCTATTTTTTCTCTCCGAGTTTGGGGCACGTCCTCTCGGTGGTGGGACGGAATATTACAGAGGTTTTCATCAAAGAATTAGGCCAACCCAAATGGGGTTTTCCTTAAACATAGATGTAGCTTCAAGAGCTTTTTATGAACCAATTCTTGTCACTGAATTTATTTCCAAACATTTTAATTTGGATTTGTCAAGGCCAAGGGCACTGTCTGATCAAGATCGAGTAAAGATTGAGAAAGTCTTGAAAGGTGTTAAGGTAAAACTATCTATCTCTTGGTGGGGAAATAAGGAGGTGCAAGGTGACCGGTCTCTCAAGAGAGCCGCTTGGAGTCCTAACAAATTATATGAAGCTAGTGAAGTGCAATTTTGGAGTTGCATTTGCTTTTCAAATGAAGTGAGCCTTACTAAATTTTGTACTAGATTGGTTGAAATGTGTCGAAGCAAGGGAATGATATCTTGTTTGTTTGTATTATTTTATGAGATAATTATATATATGTTTCCTCTAATTTTTTACAAGTTTTATTTTTGA 555 0.3676 MIYIVACGWELFFLSEFGARPLGGGTEYYRGFHQRIRPTQMGFSLNIDVASRAFYEPILVTEFISKHFNLDLSRPRALSDQDRVKIEKVLKGVKVKLSISWWGNKEVQGDRSLKRAAWSPNKLYEASEVQFWSCICFSNEVSLTKFCTRLVEMCRSKGMISCLFVLFYEIIIYMFPLIFYKFYF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07943 184 SUPERFAMILY PAZ domain 22 107 IPR036085 GO:0005515
Vivi3g07943 184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 17 98 - -
Vivi3g07943 184 Pfam Argonaute linker 1 domain 12 56 IPR014811 -
Vivi3g07943 184 Gene3D - 120 170 - -
Vivi3g07943 184 SMART DUF1785_2 5 57 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07943 Vivi-Chr3 217039455 217043285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07943 12 98 Eukaryotic Initiation Factors Gene Family AT1G48410 52.273 2.13e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07943 K11593 - vvo:131593579 382.489