Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07941 ATGTCGCCAGAATATGCTATGGAAGGATTATATTCTGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAGTTTGTGGAAAAAGAAACGGTGGATTTTATCTTGCAGAACATGGTCAAAGTCTTCTAATATATAGTTGGAATCTTTGGTGTGAAGGAAAAAGTTTGGAACTTTTAGATCCAATACTAAAAGAGACATACATAGAAAATGAAGTCATGAAGTGTGTACATATTGGTTTATTGTGTGTACAAGAAGATGCAATTGATAGACCAACCATGTCCAATGTTGTTGTCATGTTGGCAAGTGACACAATGGCACTTCCCACTCCTAATCAACCAGCATTTTCAGTTGGAAGAAAAGCAGTTGAAGATGAATCAACATCAAAAGCTTCCAATAATCTTTCTATAAATGAAGTTACAATATCAAATGTTTTTCCTAGATAG 453 0.3377 MSPEYAMEGLYSVKSDVFSFGVLLLEIVCGKRNGGFYLAEHGQSLLIYSWNLWCEGKSLELLDPILKETYIENEVMKCVHIGLLCVQEDAIDRPTMSNVVVMLASDTMALPTPNQPAFSVGRKAVEDESTSKASNNLSINEVTISNVFPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07941 150 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Vivi3g07941 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Vivi3g07941 150 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
Vivi3g07941 150 SUPERFAMILY Protein kinase-like (PK-like) 1 130 IPR011009 -
Vivi3g07941 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 146 - -
Vivi3g07941 150 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07941 Vivi-Chr3 217010088 217014645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07941 1 150 Receptor kinase-like Gene Family AT4G23150 48.387 4.51e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07941 PK_Tyr_Ser-Thr 9.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07941 - - mtr:25490357 244.588