Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07919 ATGGAAGAAGGGTTTGGTCGAAACTCGGTTCCTCCTCCAGGCTCCATTGACAAGTCTAAGATTCTAGACATTAAGCCTATAAGATGTTTGATACCTGTTTTTTCGAAGAATCCTCAAGCTCCGTATTCAGGAGAGTATCCGGCCGGGTTTTCTCCGTTTTTCCCATTTGGTGGACCTCAGGAGACTTCAACCACTGGGGTGAAACCTAGAGGTAGAGCAATGCCGACTCCGATTCGGTCATTTAGGAGCCCTGTAGGCGAGGATGAGGATCTCAATGGCAATGATGGTTATAGTCACAAAAGAAATGCACCGCCGAATACGAGCCGGGTCAAGTTACAGAAGATCAAACCAAATCATAATTTCCATGCTGATTTGAGTGGTTTAGTTGGTATAGGCGCGGCACAAAAAAACGATGGTAACCGAGAAGTTGTTAATATTGTGCTCATGTCGTTTGATGCACTGAGAAGAAGGCTAAGTCAACTTGTTGATGCCAATGATGTGGACATGGGTATGTTCAAGCGTACTGATTTGAAAGCTGGGAATATTTGTATGTCCAAAGGAATTCGAACAAATGCGACAAAGAGAATTGGATCGGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTGTTGGTTTGCATGCCCAATCGATGGGGGGAATTGATGCCATCAAGAGTGACCATGAGAATGAGACTTTGGCTGTTAGCATTGTTTCGTCGGGAGAATACGACGACGATGAAGCTGAGGATGGTGATGTTTTAATTTACACCGGTCAGGGTGAGAATTTTAACAAGAAAGAGAAGCACTTGTCTGATCAGAAGCTTCATAGGGGTAATCTTGCTTTAGATAGAAGTTCAAGACAACATAATGAAGTAAGAGTCATCCGGGGAATCAAAGATACTACGTCTGTGGGCTCAAAAATCTATGTCTATGATGGTCTGTATAAAATTCAAGATTCATGGGCTGAAAAAGCAAAAAGCGGCGGCGGCGGCGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTTCTGTTTGGAGATCAATTCAGAAGTGGAAATCTGGCATTCTTGCGAGGTCTGGACTTATTCTCCCGGACCTATCCTCGGGAGCTGAGAGTATTCCTGTTTCACTTGTCAATGAAATCGACAACGTGAAGTCACCTGCCTTTTTCACGTATTTCCAGTCGCTTAGACATCCAAAATCATTCAGTTTAACGCAGCCTTCACATGGTTGCAGCTGTAGTGCTAAAAAGGCATGTATCCCAGGTGATTTGGACTGCTCTTGCATTCAGAGAAACGAAGGTGATTTTCCGTATATTATCCACGGTGTTCTGGTGAGCCGGAAGCCATTGGTTCATGAATGTGGCCCTACATGTAAATGTTATCCTAACTGCAAAAACCGAGTATCTCAATCCGGTTTAAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGCTGGGGTCTTCGATCATGGGATCCTATTCGTGCTGGCGCTTTTATTTGCGAGTATGCAGGAGAAGTTATTGATAAAGCTAGGTTAACTCAGCTTATACAAGAAGGAGACGCTGATGAGTATGTTTTTGATACAACCCGTGTTTATGAATCTTTCAAGTGGAATTACGAGCCTAAGTTACTCGATGAAGTGAGAACAAACGAGTCTAGTGAGGATTATGCTATGCCCCATCCTCTTATTATAAATGCTAAAAACGTTGGAAACGTGGCTAGATTCATGAATCATAGTTGCTCACCAAATGTTTTCTGGCAGCCTGTCTTATACGAAGAGAACAATCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATTCCACCAATGCAAGAGTTAACATATGACTACGGGGCTGATCGATCTGATAATGCTGAGGGTAGTAGTGCACACAAAGGTAGAAAGAGATGCTTTTGTGGATCAGTGAAATGCCGTGGTTCTTTTACTTGA 1998 0.4284 MEEGFGRNSVPPPGSIDKSKILDIKPIRCLIPVFSKNPQAPYSGEYPAGFSPFFPFGGPQETSTTGVKPRGRAMPTPIRSFRSPVGEDEDLNGNDGYSHKRNAPPNTSRVKLQKIKPNHNFHADLSGLVGIGAAQKNDGNREVVNIVLMSFDALRRRLSQLVDANDVDMGMFKRTDLKAGNICMSKGIRTNATKRIGSVPGVEIGDIFFFRMEMCVVGLHAQSMGGIDAIKSDHENETLAVSIVSSGEYDDDEAEDGDVLIYTGQGENFNKKEKHLSDQKLHRGNLALDRSSRQHNEVRVIRGIKDTTSVGSKIYVYDGLYKIQDSWAEKAKSGGGGGLFKYKLIRVPGQPSAFSVWRSIQKWKSGILARSGLILPDLSSGAESIPVSLVNEIDNVKSPAFFTYFQSLRHPKSFSLTQPSHGCSCSAKKACIPGDLDCSCIQRNEGDFPYIIHGVLVSRKPLVHECGPTCKCYPNCKNRVSQSGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLTQLIQEGDADEYVFDTTRVYESFKWNYEPKLLDEVRTNESSEDYAMPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMQELTYDYGADRSDNAEGSSAHKGRKRCFCGSVKCRGSFT 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07919 665 Gene3D - 179 366 IPR036987 -
Vivi3g07919 665 SMART preset_2 375 471 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi3g07919 665 SMART set_7 487 640 IPR001214 GO:0005515
Vivi3g07919 665 SUPERFAMILY SET domain 384 662 IPR046341 -
Vivi3g07919 665 SMART G9a_1 192 350 IPR003105 -
Vivi3g07919 665 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 55 665 IPR025794 GO:0016571
Vivi3g07919 665 MobiDBLite consensus disorder prediction 53 108 - -
Vivi3g07919 665 ProSiteProfiles YDG domain profile. 197 346 IPR003105 -
Vivi3g07919 665 Gene3D SET domain 367 664 IPR046341 -
Vivi3g07919 665 Pfam SAD/SRA domain 196 350 IPR003105 -
Vivi3g07919 665 ProSiteProfiles Pre-SET domain profile. 421 484 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi3g07919 665 ProSiteProfiles Post-SET domain profile. 649 665 IPR003616 -
Vivi3g07919 665 ProSiteProfiles SET domain profile. 487 634 IPR001214 GO:0005515
Vivi3g07919 665 Pfam Pre-SET motif 379 479 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi3g07919 665 SUPERFAMILY PUA domain-like 179 368 IPR015947 -
Vivi3g07919 665 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 180 365 - -
Vivi3g07919 665 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 102 657 - -
Vivi3g07919 665 Pfam SET domain 498 634 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07919 Vivi-Chr3 216749463 216752643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07919 6 664 Su(var)3-9 homologs AT1G73100 52.709 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi3g07919 SAD_SRA 2.4e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07919 K24405 - gmx:100812173 951.044