Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07857 ATGAGATTAAACGAATTAACAAAAAAGGCAGAGAAATTTGACAAAATGGAACCTCATCGCCGTCTTCCGGATGTAGAACGTTTCACATCTACAAATTACATTTCTTTTCAAAGTAGAGAGTCAAAATACAAAGATTTGCTGGAGGCACTAGAAGATGACAACAACTATATGATCGCATTGCAAGGGATGGGGGGCAGCGGAAAAACTACATTGGCCAAAGTAGTGGGTAGAGAACTAAAGAAAAATAAACAATTCGCTCATGTAATCGCTACAACTGTGTCGTTTGATCCTAATACAAAAAGAATTCAAGATGATATTGCCGGACCTTTAGGATTAAAATTGGACAAAATTCATGAATCAGAACGACCCAAAAAACTAAGGAATAGATTAACAAATGGTAATAAAATTCTACTAATATTGGATGATGTGTGGGATCGAGTCTTGCCTATTGATTTTGATCTAATAGGAATTCCAAAAAAAACCAATCACAAAGGTTGCAGACTTCTTATAACCACACGCAGTAAACGAATTTTCAATATAATGGGTTGTGATAGGATGATTGAATTGGAGCTCTTATCTGAAGAAGAAGCATGGGACATGTTCAAAATGTATGCCGGTATAAGCAATAGTTCTTCAGAAAGTTTGATCACTAAGGGACGTCAAATTACTAAAGAATGCAAACATTTACCTGTTGCAATTGCAGTTATCGCTAGTAGTTTAAGGGGCCAACAATATCGTAAGCACACATGGGATGCTACCTTAAAATCCTTGAAGAACCCTGTCCTCATGGACGATGTTCATAAAGAAAAGGTTGAAATTTATAAATGTTTGAAGTTTAGCTATGATTTTATGAAGGATGAAAAAGCCATGCGATTATTCCTCTTATCATCTGTATTCCCAAAAGGTGAAGACATCCCTCTTGAATTTCTAACTAGACTTGGCATTGGAACGGGCCTTTTCGGGGAAGATTATGGCAAATACGATGATGCTCGAGATGAAGTTGTTGTAGCCAAAAATAAACTCATAGATTCTTGTTTGTTGATGGAGGTTGGTGATAAATATGTAAGAATGCATGATTTTGTTCGTGAAGTGGCTCATTGGATAGCAAATAAAGAGATTCAAAGTGTAAATTTGTCCAACAAAGATACAAAATCATCACTTGAAAAGGAAATGAATGTTAAATATTTATTTTTTAAAGGGAATGACATGGATTTGTTTTCCTCTAGGTATGATGGTTCGAAACTTGGTATTCTAATTGTCGACATGGAAATAGTTGAAGACTGTAAAAGTATAGAAGTCCCAAATTCATTCTTTGAAAATATTGGTAAGCTTCGAGTTTTGTGCTTTTTAGGTCATGAAAATCAACCCCTATTAGTACCAGATTCAATTCGCTCATTGGCAAATATTCGATCTATATTGGTTGATGGAGTTGATTTAGGTGACATCTCTGTATTGGGAAATCTACAAAGTCTTGAGACTCTTGATTTGGTTGAATGCAAAATCAATGAATTGCCACACGAAATTGCAATGTTGGGGAAATTAAAATTGTTAAACTTGGAAGAATGTGAAATTAGAAGGAATAATCCATTTGAGGTTATTGAAAGATGCTCAACACTTGAAGAGTTGTACTTCATAGATAGCTTTAATGATTTTTGTGGAGAAATAACCTTACCCGAGTTACAAAGGTATCGTATCCGTAAAGGGTGGAGTGTGATGGATGATTCACTATCAAAATATGTGTCTTTTGAGGCAGGTAATGATGAATGTTTTTTTTCAAAAGAAACATTCAAGTATTGCATGCAAACAACAAAGGGTCTTCAACTAAATGGAATAAAGGAGGGATGGAAAAATCTCATTCCCGAGATTGTTTCTAACGGTATGAATGATCTTGTTGAGCTTCGTTTGACACGTATTTCACTTTTAAAGTGTCTGATTAGCACTATTCATTCTGAAGTACCAAATACATTGTCCAAATTGGTTGTACTAAAACTGGATACAATGGAAAATTTGGTAGAACTGTTCAATGGCTCCATTTCTGTTGACTTTTTGAAGAGTTTAAAGAAACTATCGATAAAGAATTGTAAAATGTTTCGAAGATTGTTTAATTGCACACTTAATTTCTGCAATCTAAGGAGTGTGACACTGCAGAAATGCCCAATGTTGATTAGCCTCTCTCCATTATTAACTTCTCGGAACATCGTGCTGCTAGAGAAGTTGAAAATAGCTGATTTTGAGGGATTGGACAACAAAGTAATAGATGACAATAATAAAGATGACAAGAGTCATGGACCAATGTTTCCAAAACTAAGAGTTCTTGACATTGATCGATGTCACCGATTAGAATCAATATTCCACTCCCTATCTTTTCAAGATCTTCCAGCACTAGAAAATATCAACATAAAGAGATGTGATGAGCTAAAGCATATACTTGGCCAAAACCAACATGTAGAACGCAATTCACTAAAAGAAATAAATCTGTTTGAATTACCAAATTTCATGAGTATTTTTCCAAGATATTCTCATTCTATGTCTTCCCGAGTGAATGAGTCCTCTTCAACTTCTAGAAGTGGTTCCAAGGTACACAAAAAAGTGGACACTATCAAATGCAATATCTTCTCTTTGACATCTTGTCATGGTTATAGACGCAAACTTGGGAGTATTTCAACTACTAAAACCCCATCGACTCATAAGGATCCACTGCAGAACAACTCAACAGCATCAACATCAGTATCAAGTTCACACCGTCTTCAAATATGGGAAAGTGTACAATGTTTTCAAGTGCAATCGAGTTTCCTGTGCAATGTAAAAGAGATTACGCTTTCTTATATTTCGAATATAACATCGGTGCTTATCCTGTCTTTTGCTCCAACAATGTTGGTGGAAACTTTGACGATTAGGAATTGTCATAAATTGAAGCACATAATAGTAGACATTGAAGATGATGAAAGTGCTGACAAGAATTGGGGTAATGTGTTCCCAAAATTGAAAATGCTTGACGTTCGAGATTGCGAGCAATTGAAATACGTATTTGGACACTACACTGATGGACATCCAAACCACCATGAGATTCACTTTCATCTTCCAGCACTACAACGTCTCGAACTTTACAATCTTCCCAATTTAATTGCCATATCTCCTAAACAATATTGCATAAGATTTCCACCTATTAAAGAACTTAAAATCACAGAATACTCCAAGGATGCTATCAAACCTAATGATGAATTCGGTAAATATCAGTCCGATTCAAAATTTGTGCATAATGCAATCATGAAGGTATCAATTTCTCATGATCTTCAGCTAGGGGAACCTTCTCAGTGCCTTCCTGTACAATCAAACATCTTGTGCAATGTAATAGGGATTACGCTGTTTGGTATTTCAAAGATAAAATCTGTGTTTAAGATTTCTATTACTCCAAGATTGTTGGTGGAATCTTTAAGAATTGAGAACTGTGATGAATTGAAGCAAATAACAGTAGATATTGGAGATGATAAAAATGGTGGAAATATTTGGAGAAATATCTTCCCAAAATTGGAAAGACTTTGCATTATAAATTGCATGAAATTGGAATACATATTTGGAAACTACACTGATGATCATCCTGGCCACAATAAGATTCCACTTCATCTTCCAGCATTACAATATCTCGAACTTTGCAATCTACCAAGTTTAGTCTCCGTGTGTCCTAAACAATATTGCACACCATTTCCACATTTAAAAGAACTTATACTCAAAGATTGCTCTCTGGATACTACAATCACAAAGTTCCTTTATATATGGGAGCATGCTCAATACCTACCACTACCATCAAACATCATGTGCTATATAAAAGAGATTACTCTGTCTGGTTTTTCGAAGATAAAATCTGTGTGTATGCTTTCTTTTGCTTCAAGAATGTTGGTGGAAACTTTGAGAATTGAGCATTGTGATGAACTAAAGCACATAATAGTAGGCACAGGAGATGATGAAAGTGGTGGCAATAATCGGGACAACGTCTTCCCAAAATTGGAAACACTTTATGTTCAAAATTGCAGGAAATTGGAATACATATTTGGACACTACACTGAAGACCATTCAAACCACAATGAGATTCGTCTTCATCTTCCAGCACTACAATGTCTCAGACTTTGTGCTCTGCCAAGTTTAGTAGCCATGAGCGGTAAACAATATGACGTAACATTTTCTCCTTTGAAAGAATTTGAACTTGTGGAATGCTCTTTGGATAATACAATCATAAAGGATTTGAGTGGGAGCTTGGAACATTTTATTGCTTTTGAAAGTCTCAAGGTACATAACTCCATAGCAGAAAAAAAAAATTTGTCTCAATGA 4326 0.3532 MRLNELTKKAEKFDKMEPHRRLPDVERFTSTNYISFQSRESKYKDLLEALEDDNNYMIALQGMGGSGKTTLAKVVGRELKKNKQFAHVIATTVSFDPNTKRIQDDIAGPLGLKLDKIHESERPKKLRNRLTNGNKILLILDDVWDRVLPIDFDLIGIPKKTNHKGCRLLITTRSKRIFNIMGCDRMIELELLSEEEAWDMFKMYAGISNSSSESLITKGRQITKECKHLPVAIAVIASSLRGQQYRKHTWDATLKSLKNPVLMDDVHKEKVEIYKCLKFSYDFMKDEKAMRLFLLSSVFPKGEDIPLEFLTRLGIGTGLFGEDYGKYDDARDEVVVAKNKLIDSCLLMEVGDKYVRMHDFVREVAHWIANKEIQSVNLSNKDTKSSLEKEMNVKYLFFKGNDMDLFSSRYDGSKLGILIVDMEIVEDCKSIEVPNSFFENIGKLRVLCFLGHENQPLLVPDSIRSLANIRSILVDGVDLGDISVLGNLQSLETLDLVECKINELPHEIAMLGKLKLLNLEECEIRRNNPFEVIERCSTLEELYFIDSFNDFCGEITLPELQRYRIRKGWSVMDDSLSKYVSFEAGNDECFFSKETFKYCMQTTKGLQLNGIKEGWKNLIPEIVSNGMNDLVELRLTRISLLKCLISTIHSEVPNTLSKLVVLKLDTMENLVELFNGSISVDFLKSLKKLSIKNCKMFRRLFNCTLNFCNLRSVTLQKCPMLISLSPLLTSRNIVLLEKLKIADFEGLDNKVIDDNNKDDKSHGPMFPKLRVLDIDRCHRLESIFHSLSFQDLPALENINIKRCDELKHILGQNQHVERNSLKEINLFELPNFMSIFPRYSHSMSSRVNESSSTSRSGSKVHKKVDTIKCNIFSLTSCHGYRRKLGSISTTKTPSTHKDPLQNNSTASTSVSSSHRLQIWESVQCFQVQSSFLCNVKEITLSYISNITSVLILSFAPTMLVETLTIRNCHKLKHIIVDIEDDESADKNWGNVFPKLKMLDVRDCEQLKYVFGHYTDGHPNHHEIHFHLPALQRLELYNLPNLIAISPKQYCIRFPPIKELKITEYSKDAIKPNDEFGKYQSDSKFVHNAIMKVSISHDLQLGEPSQCLPVQSNILCNVIGITLFGISKIKSVFKISITPRLLVESLRIENCDELKQITVDIGDDKNGGNIWRNIFPKLERLCIINCMKLEYIFGNYTDDHPGHNKIPLHLPALQYLELCNLPSLVSVCPKQYCTPFPHLKELILKDCSLDTTITKFLYIWEHAQYLPLPSNIMCYIKEITLSGFSKIKSVCMLSFASRMLVETLRIEHCDELKHIIVGTGDDESGGNNRDNVFPKLETLYVQNCRKLEYIFGHYTEDHSNHNEIRLHLPALQCLRLCALPSLVAMSGKQYDVTFSPLKEFELVECSLDNTIIKDLSGSLEHFIAFESLKVHNSIAEKKNLSQ 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07857 1441 SMART AAA_5 54 192 IPR003593 GO:0016887
Vivi3g07857 1441 PRINTS Disease resistance protein signature 57 72 - -
Vivi3g07857 1441 PRINTS Disease resistance protein signature 130 144 - -
Vivi3g07857 1441 PRINTS Disease resistance protein signature 226 240 - -
Vivi3g07857 1441 PRINTS Disease resistance protein signature 486 502 - -
Vivi3g07857 1441 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1168 1404 - -
Vivi3g07857 1441 Gene3D Ribonuclease Inhibitor 356 578 IPR032675 -
Vivi3g07857 1441 Pfam NB-ARC domain 45 282 IPR002182 GO:0043531
Vivi3g07857 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 287 IPR027417 -
Vivi3g07857 1441 Gene3D Ribonuclease Inhibitor 1060 1375 IPR032675 -
Vivi3g07857 1441 MobiDBLite consensus disorder prediction 888 907 - -
Vivi3g07857 1441 Gene3D Ribonuclease Inhibitor 604 856 IPR032675 -
Vivi3g07857 1441 SUPERFAMILY L domain-like 356 833 - -
Vivi3g07857 1441 Gene3D - 21 188 IPR027417 -
Vivi3g07857 1441 FunFam Probable disease resistance protein At1g61300 20 186 - -
Vivi3g07857 1441 SUPERFAMILY RNI-like 1168 1428 - -
Vivi3g07857 1441 Gene3D - 191 285 IPR042197 -
Vivi3g07857 1441 Gene3D Ribonuclease Inhibitor 873 1059 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07857 Vivi-Chr3 215911637 215924577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07857 58 397 WRKY Transcription Factor Family AT5G45050 25.284 3.60e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07857 - - vvo:131593547 2850.08