Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07851 ATGGGGTCTCAAGTTGTCTGCGATAATAGTAGTGAAAACCATTCGCAATTCCAGCCTTTGGTGAGGCAAAATTCAATGTACAATCTCACCCTCGATGAAGTTCAGAGTCAACTAGGCGACTTGGGGAAGCCGCTAAGCAGCATGAACCTAGACGAGCTTCTGAAAAACGTATGGACTGTCGAGGCAAACCAGTCCCAGTCCATTCAAATGGACAACGCTAACGTAGCTCAAGCCTCTCAAGCCGCTCAAGCCGCTCAAACCGGACAAGCCGGACAAGGACAAGTTGTTCTGCAACATCAACCTAATATGCCGTTAGTCGGTGAGTTAAGCAAGAAAACGGTTGACGAGGTTTGGAGAGATATCCAACAAACTAAAGATCACGAGGAGGTGAGGCCTCAAGAGAGGCAATCTACTTTGGGAGAGATGACATTAGAGGATTTTTTGGTGAAAGCTGGCGTCGTTTCGGTTGCATCTTCTAATGGAAAGAGTACTACTAACAGTCCCAGTCCCAAAGTTGATTCAAGCCTAGTGGTACCGCAGTTTGTTCCGCACGGTCCGTGGATGCAGCAGTACGCGCAGGCACATTATCCGCATCCACAACAAAATGTGATGCCAACTTATGTTCCAAACCAGCTCTTAGCACAGCCATTGCACATGGTGGCCGCCGGTTCTCCAATGGATGTTGTGCCATATGCAGATGGAGGTCAGGTGGCAATGGCTTCGCAGATGGGAAACTTATCGGATTCAAAGAAATCAGGTCTGAAGCGGGGCGTACCAGATGAGAAAGCTGAGAGGACAGTCGAGAGGAAGCAGAAGAGGATGATCAAGAATCGCGAGTCAGCTGCCCGCTCAAGAGCAAGGAAACAGGCCTACACAACTGAATTGGAGATCAAAGTCAATCGTCTGGAAGAGGAAAACGAAATGCTGAGGAAAGAAAAGGAACTTACGAACATGATAGCGAGTGTTCCACCGCCCGAGCCGAAATGTCAGCTTCGTCGTGTATCTTCGGCTGAATTTTGA 1020 0.4853 MGSQVVCDNSSENHSQFQPLVRQNSMYNLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVEANQSQSIQMDNANVAQASQAAQAAQTGQAGQGQVVLQHQPNMPLVGELSKKTVDEVWRDIQQTKDHEEVRPQERQSTLGEMTLEDFLVKAGVVSVASSNGKSTTNSPSPKVDSSLVVPQFVPHGPWMQQYAQAHYPHPQQNVMPTYVPNQLLAQPLHMVAAGSPMDVVPYADGGQVAMASQMGNLSDSKKSGLKRGVPDEKAERTVERKQKRMIKNRESAARSRARKQAYTTELEIKVNRLEEENEMLRKEKELTNMIASVPPPEPKCQLRRVSSAEF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07851 339 SMART brlzneu 265 333 IPR004827 GO:0003700|GO:0006355
Vivi3g07851 339 MobiDBLite consensus disorder prediction 245 290 - -
Vivi3g07851 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 267 312 IPR004827 GO:0003700|GO:0006355
Vivi3g07851 339 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 336 IPR043452 GO:0003700|GO:0045893
Vivi3g07851 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 272 287 IPR004827 GO:0003700|GO:0006355
Vivi3g07851 339 CDD bZIP_plant_BZIP46 269 316 - -
Vivi3g07851 339 SUPERFAMILY Leucine zipper domain 269 315 IPR046347 GO:0003700|GO:0006355
Vivi3g07851 339 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 267 319 - -
Vivi3g07851 339 MobiDBLite consensus disorder prediction 319 339 - -
Vivi3g07851 339 Gene3D - 267 321 - -
Vivi3g07851 339 MobiDBLite consensus disorder prediction 253 290 - -
Vivi3g07851 339 Pfam bZIP transcription factor 269 319 IPR004827 GO:0003700|GO:0006355
Vivi3g07851 339 Coils Coil 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07851 Vivi-Chr3 215598160 215600901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07851 18 339 bZIP Transcription Factor Family AT3G56850 48.649 8.63e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g07851 bZIP_1 1.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07851 K14432 - gmx:100811685 370.548