Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07847 ATGGATATAGATCTCAGGTTACCCTCTGGTGAACATGATAAAGAGGAAGAAGAAACAACTACACTTGATCACATGTTGGAAGGTGACGAAAAATTGCACAATGGAGGTATAGACGGCAGGCATATTGTTGATGCTGGCATTGAAGTGCATGCTCTAAATGGCGGAGATTTGAATTCCCCCACAGTTGATATGGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTCGAGTCCCATGGGGAAGCATATTCTTTCTACCAAGAATATGCTCGGTCAATGGGATTCAACACTGCAATACAAAATAGTCGTCGTTCAAAAACGTCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCCTTCAACCGACCACGAGCACGACAGAACAAGCAAGAATCTGAAAATTCAACTGGTCGAAGATCTTGTTCTAAAACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCAGATGGGAAATGGGTTATACATAGTTTTGTAAAGGAGCATAATCACGAGCTCTTACCAGCCCAGGCAGTAAGTGAACAAACACGAAGAATGTATGCTGTGATGGCCAGGCAATTTGCAGAATACAAAACTGTGGTTGGTATCAAGAATGAAAAGAATCCGTTTGAAAAAGGAAGGAATTTGGGACTGGAGTTCGGGGAGGCTAAACTTATGCTTGATTTTTTTATTCGGATGCAAAATATGAATTCTAACTTCTTTTACGCAGTAGATCTCGGTGAGGATCAACGTCTGAAAAGTCTTTTATGGATTGATGCTAAAAGTCGGTATGACTACATCAACTTCTGTGATGTAGTGTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGTGCTTTTTGTTGGGGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCACAACTTTTTCTTGGCTATTACGGACGTGGCTGAAAGGTGTTGGTGGTCAAGTTCCAAAAGTGGTAATTACTGACCATGACATGACTTTGAAGTCAGTTATTTCAGATGTTTTTCCTAGTTCTTGCCATTGTGTTTGCTTATGGCATATAATGGGGAAGGTATCTGAAAATTTAGCTCCTGTAATTAAAAAACATGAGAATTTTATGGCAAAATTTGAAAAGTGCATATTTAGGTCACTGACCAGTGATGATTTTGACAATAGATGGGAGAAGATTTTGGATAGATTTGAGCTTCGACAAGATGACTGCATGCTGTCTTTATACGAAGATCGTAAGTTATGGGCACCAACATTCATGAAAGATGTGTTCTTAGGGGCTATGTCTACTGCCCAACGATCTGAAAGTGTAAATTCATTCTTTGACAAATATGTTCATCGGAAGACCTATGTGCAAGATTTTATTAAACAGTACGATTCCATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAATATTAAAAACTCCTTCACCTTTAGAAAAGACTGTTGCAGGGATTTGCACACATACAGTATTCAAGAAGATTCAAGCGGAGATTATTGGTGCAGTGGCTTGTCATCCTAAAGTTGACAGGCAGGATGAGACAGCTGTTGTTCATAAGGTGCATGATATGGAAACCAACAAAGACTTTTTTGTTGTGGTGAATCAAGTAAAGTTAGAGCTGTCTTGTATATGTCGGCTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGGTGGTTCTTCAATACTCTGGCCAATCAGTGTTCCCAACTCAATATATTTTGAGACGGTGGGCAAAAGATGCAAAGGCCAGGAATATAATGGACGAAGAATCTGAACTTATGCTGGCTAGGGTTCAACGTTACAATGATTTATGTCATCGATCACTAAAACTGAGTGAAGAGGGATCATTGTCTCAAGATAGTTATAGTATTGCATTCCATGCACTAAATGAGGCATACAAAAGTTGTGTTAGTGTTAACAATTCTAATAAGAGCCCTACAGAAGCTGGTACATCAGGGGCTCATGGCCAGCTTTCCATTGAAGAAGACACCCAAAGTAGAAATATGGGAAAGTCAAACAAAAAGAAGAATCCAACCAAAAAGAAAAAGATGAACTCGGAAGCAGAGGTGATGACTGTTGGGGCACTAGACAACTTGCAACAAATGGACAAATTCAACACCAGAGCTGCAGTAACCCTTGAAGGTTATTATGGCGCACAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACTCGTGAAGATTACTACGGGAATCAACAGACTCTTCAAGGACTGGGACCAATAAATTCCATGCCAACCAGCCACGATGGTTATTATGGTGCACATCAAGGCATGCCCGGTTTGGCACAACTGGATTTTTTGCGAACTGGTTTCACATATAATATGAGGGATGATCCTAATGTGAGAGCAGCACAGTTACACGAGGATCCATCAAGACACGCGTGA 2532 0.3981 MDIDLRLPSGEHDKEEEETTTLDHMLEGDEKLHNGGIDGRHIVDAGIEVHALNGGDLNSPTVDMAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAVMARQFAEYKTVVGIKNEKNPFEKGRNLGLEFGEAKLMLDFFIRMQNMNSNFFYAVDLGEDQRLKSLLWIDAKSRYDYINFCDVVSFDTTYVRNKYKMPLVLFVGVNQHYQFILLGCALISDESATTFSWLLRTWLKGVGGQVPKVVITDHDMTLKSVISDVFPSSCHCVCLWHIMGKVSENLAPVIKKHENFMAKFEKCIFRSLTSDDFDNRWEKILDRFELRQDDCMLSLYEDRKLWAPTFMKDVFLGAMSTAQRSESVNSFFDKYVHRKTYVQDFIKQYDSILQDRYEEEAKADSDTWNKVAILKTPSPLEKTVAGICTHTVFKKIQAEIIGAVACHPKVDRQDETAVVHKVHDMETNKDFFVVVNQVKLELSCICRLFEYKGYLCRHALVVLQYSGQSVFPTQYILRRWAKDAKARNIMDEESELMLARVQRYNDLCHRSLKLSEEGSLSQDSYSIAFHALNEAYKSCVSVNNSNKSPTEAGTSGAHGQLSIEEDTQSRNMGKSNKKKNPTKKKKMNSEAEVMTVGALDNLQQMDKFNTRAAVTLEGYYGAQQSVQGMLNLMGPTREDYYGNQQTLQGLGPINSMPTSHDGYYGAHQGMPGLAQLDFLRTGFTYNMRDDPNVRAAQLHEDPSRHA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07847 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 677 IPR031052 GO:0006355
Vivi3g07847 843 MobiDBLite consensus disorder prediction 681 727 - -
Vivi3g07847 843 MobiDBLite consensus disorder prediction 681 706 - -
Vivi3g07847 843 MobiDBLite consensus disorder prediction 132 164 - -
Vivi3g07847 843 Pfam MULE transposase domain 288 380 IPR018289 -
Vivi3g07847 843 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Vivi3g07847 843 Pfam SWIM zinc finger 577 602 IPR007527 GO:0008270
Vivi3g07847 843 SMART 26again6 579 606 IPR006564 GO:0008270
Vivi3g07847 843 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07847 Vivi-Chr3 215538091 215545495 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07847 FAR1 2.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07847 - - cam:101505784 1565.44