Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07788 ATGCAAAGTTCCAATAGTGAACCAAATTTGAGAGACCACTCTCAATTTGAACAAACATTTTCTTTACCTCCTAAAAGTAAAATGAGTAGTAGTAATAGATATGATGAAATAGGTGGATCCTGTTTAGATGGATTAATATCAGAATTAGGCGGAACGAGGCTTAATCACCGGACATATTCGGATAGCTTGTTATCGGAGCCGCACCAGCACCAGCAGCAGGATGTACCTTATTGGTTGAATGATCTCCTTGAGGATGACGACGAGCCTGAAGAGGGAGAGAAACCTCCTAGGAGTCATAGAAGATCATCAAGTGACTCAATAGCATTCTTACATAATAGAAATATTCTTCTTCAAGATTCTGATAGGAAGGAACATATTATTAATGTAACAAACCCGCAACTCGCCTTTTTGCACCAACAACATCCTAGAATTGATCCTTCGAAACGTGTCAGAAGGCATTCAGCTCAACAGTACCGGGCGAGGAAAGTTCAATACATTGGAGAACTAGAAAGAAGTGTTCAATCTTTACAGGCAGAAGGATATGAAGTTTCAGCAGAGCTTGAATTTCTTGATCAGCAAAACCTGATATTAGGTATGGAGAACAGGGCCCTCAAACAACGTTTGGACAGTTTATCTCAAGAACACTTCATTAAATGCTTGGAACAGGAAGTGCTTGAGAAAGAAATCTCAAGGCTTAGAAATCTTTATCAACAACAACAACACAGGCAGCAGCAACAGCAGCAAAAACACAATGGTAGAAATCGATCTAAACGTCAAGATATTGATTCGTCAATTGCCAAACTCTCGTTGAAGAATAAGGGAACTGAGTCATCACAGAAAGCCATATAG 849 0.3958 MQSSNSEPNLRDHSQFEQTFSLPPKSKMSSSNRYDEIGGSCLDGLISELGGTRLNHRTYSDSLLSEPHQHQQQDVPYWLNDLLEDDDEPEEGEKPPRSHRRSSSDSIAFLHNRNILLQDSDRKEHIINVTNPQLAFLHQQHPRIDPSKRVRRHSAQQYRARKVQYIGELERSVQSLQAEGYEVSAELEFLDQQNLILGMENRALKQRLDSLSQEHFIKCLEQEVLEKEISRLRNLYQQQQHRQQQQQQKHNGRNRSKRQDIDSSIAKLSLKNKGTESSQKAI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07788 282 Gene3D - 146 218 - -
Vivi3g07788 282 SMART brlzneu 145 203 IPR004827 GO:0003700|GO:0006355
Vivi3g07788 282 MobiDBLite consensus disorder prediction 236 282 - -
Vivi3g07788 282 MobiDBLite consensus disorder prediction 236 250 - -
Vivi3g07788 282 MobiDBLite consensus disorder prediction 265 282 - -
Vivi3g07788 282 MobiDBLite consensus disorder prediction 85 105 - -
Vivi3g07788 282 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 20 119 IPR044797 -
Vivi3g07788 282 SUPERFAMILY Leucine zipper domain 151 202 IPR046347 GO:0003700|GO:0006355
Vivi3g07788 282 CDD bZIP_plant_RF2 151 194 IPR044759 GO:0003700|GO:0006355
Vivi3g07788 282 MobiDBLite consensus disorder prediction 1 34 - -
Vivi3g07788 282 Coils Coil 222 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07788 Vivi-Chr3 214898088 214900142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07788 144 218 bZIP Transcription Factor Family AT2G42380 53.750 1.21e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07788 - - tpra:123914043 325.479