Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07754 ATGGAGTTTATATCCGAAGACGCTGCTAAAATATTCTACGATGAATATGCCCGACATGTAGGATTTGTCATGCGCGTGATGTCTTGTCGACGCTCAGAAAGAGACGGTAGGATTCTTGCCCGCAGGCTTGGGTGTAATAAGGAGGGTCATTGTGTTAGCATACGAGGGAAACTCGGGCCAGTTCGGAAACCAAGGGCCAGCACAAGAGAAGGTTGTAAGGCAATGATTCATATCAAGTTTGATAAGTCCGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCATTAGTAGTCTCTCCACGCGAAGTGCGCCAAACAATGGACGAGAAGGATAAGAAAATTCAGGAACTAACAACAGAGCTTCGGATGAGAAAACGGTTGTGTGTAACATATCAAGAACAATTAACTTCTTTTATGAAACTTGTTGAAGAACACAATGAGAAGCTGTCTACAAGAATTCGTCAGATACTTGATAATCTTAAAGAATATGAATCCAGAGAAGAGCTTTTGCATCAGACATAG 531 0.4124 MEFISEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKPRASTREGCKAMIHIKFDKSGKWVITKFVKDHNHPLVVSPREVRQTMDEKDKKIQELTTELRMRKRLCVTYQEQLTSFMKLVEEHNEKLSTRIRQILDNLKEYESREELLHQT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07754 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 169 - -
Vivi3g07754 176 Coils Coil 149 169 - -
Vivi3g07754 176 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07754 Vivi-Chr3 214625802 214627461 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07754 FAR1 4.4e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07754 - - gmx:100787741 316.62