Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07729 ATGGGTGCAATAAATCTCAAAGCCTACGGCAACAGTGAATCTGATGATATCTACCTGGAGCTCTTAATCAAGCTATATGGCATTCTAAGGAAGGTTGATAGCAAGTTAAATGAGGCTATACTCGAGCAATTGATCATTAGTAAAGACAACCAACTTTCAAGAATTTCTTTGACACGGTTGATCGATGCCTTGAAGGACAAGGAGGGCAAAATTGGTGTTGTTGTAGGTGTTGTAACTGATCTTGATTCTACCGTATATGATGTCCCAGCCATTAAAGTTGCAGCAATATCTTTCACAGACATGGCGCGTGCCCGGATTGAAAGTGCAGGTGGTGAATGCATTATATTTGAACAACTCCACTTTGGGGATATATTTGGATATAACTCGGTGCTTGTAACGGAGTCAACAACATCTTGGTGGCCGGACCTCTCCTCTGAGGAGGACTAG 447 0.4251 MGAINLKAYGNSESDDIYLELLIKLYGILRKVDSKLNEAILEQLIISKDNQLSRISLTRLIDALKDKEGKIGVVVGVVTDLDSTVYDVPAIKVAAISFTDMARARIESAGGECIIFEQLHFGDIFGYNSVLVTESTTSWWPDLSSEED 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07729 148 PANTHER 60S RIBOSOMAL PROTEIN L18 12 133 IPR000039 GO:0003735|GO:0005840|GO:0006412
Vivi3g07729 148 Gene3D - 3 139 - -
Vivi3g07729 148 SUPERFAMILY Ribosomal proteins L15p and L18e 28 120 IPR036227 -
Vivi3g07729 148 Pfam Ribosomal protein 60S L18 and 50S L18e 11 133 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07729 Vivi-Chr3 214342678 214343762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07729 12 119 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 50.459 1.40e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07729 K02883 - rcu:107260769 109.768