Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07728 ATGGGTACAATAAATCTCAAAGCCGACGGCAACAATGAATCCGATGATATCTACCTGAAGCTCTTAATCAAGGTATATCGCCTTCTAGTAAGAAAGCTTAGGAGAGAAAGCAAGTTCAATCGTGCTGTACTCGATCAATTGATCATTAGTAAAGACAACCAACTTTCAACAATTTCTTTGACACGGTTGATTGATGCCTTGAAGGACAAGGAGGGCAAAATTGGTGTTGTTGCAGGTGTTGTAACTGATCTTGATTCTACCGTACATGATGTCCCAGCCATTAAAGTTGCGGCAATATCTTTCACAGCAACAGCGCGTGCCCGGATTGAAAGTGCAGGGGGTGAATGCCTTATATTTGACCAACTCCCCTTTGTTGATATCTTTGGACATAACTCGGTGCTTGTAATGGAGTCAACAACATCTTGGTGGCCGGACCTCTCCTCTGAGGAATAG 453 0.4327 MGTINLKADGNNESDDIYLKLLIKVYRLLVRKLRRESKFNRAVLDQLIISKDNQLSTISLTRLIDALKDKEGKIGVVAGVVTDLDSTVHDVPAIKVAAISFTATARARIESAGGECLIFDQLPFVDIFGHNSVLVMESTTSWWPDLSSEE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07728 150 SUPERFAMILY Ribosomal proteins L15p and L18e 15 131 IPR036227 -
Vivi3g07728 150 Gene3D - 3 142 - -
Vivi3g07728 150 PANTHER 60S RIBOSOMAL PROTEIN L18 12 136 IPR000039 GO:0003735|GO:0005840|GO:0006412
Vivi3g07728 150 Pfam Ribosomal protein 60S L18 and 50S L18e 11 136 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07728 Vivi-Chr3 214339790 214340810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07728 13 135 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 51.613 1.25e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07728 K02883 - zju:107433132 113.62