Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07708 ATGAATACATCTAGTTATACATGTGAGATAGTGGAATCAAGGGAAGAGATATTACCCGAGTTCGAAATCGACGAAAAACCCGAGAGTAGTTGTTCGAATAGATTAGGAAAACGGTACTCGATTGAGGATGATATCGATCGTCTTTTCCAGGCGATTGAGATTAATAAAGGTTGTTTGTCGAGAGGCCATAGTATGTCACGGTCGCAAAAGAGTGCTCTTAAACGACCGATTAAAGTTTGTTCGACTCAAGCGTCGGGAATTGGCATCGCGGAGCGTGTTAGTTTGAAGCAGGCGCTTAGAGGATTGTGTATCTCGCAAGCATCGGAAATGGCTGCTTTGAAGAGACTATCGAAGCAATGTGGCTCGTCGAGAGTATCTGAGGTTGGCACCGGGAAAAAGTTGGTTGAAATCTCCCTCGTGCCAGAGGTGTCAAGCTCGAAAGAAATGACAACTAGGTTTGTGTCTCGAGATCAGATTGTTCCCCTTCCGCTTGAAGTTGAAGCTGACAAGCCGACGATACAAACCGAGGAAGTGCTAGAGGTCAGACCGAATCATGCTACCGAGAGTAAATTTCGTCTCGGCTCTAGCAATGAAAGTTCTGTGGACAAACCCTCGAGTATTAGTACATGTTTGGCAAAGTCGAAATTCAATAACATGAACTTCTTGAAGAAAAAGGTAAAGAAAGATCTATGTTCTGGATCAAGCTGCTCGACTAGTAGATTCGACAAGAAGAATGGAAATTCTGATCTTAACCGTGAAGTGAAGGAAAACGATGAAAAACTATCTCCATGCAGTTCAAATCATAGCATTGAAGTTAACTCGGTCAATGTTAATAGAGATTTTTCAGACAGCAAACGCGGCTTCGGTTTGAATTGCAATAAGAAAACTAAGTTTCTTCTTACAAAAGTTGACGAGAAATCAAGATGGAAGGAAAAGGGCGAGTTCTCTCATAGCTCAAAAAGTAGCATTGGGGAGCATAGCACAAGTAGCACAAGCATCAGTGAGGAGAGTAATCTTAGCAGTTCGCGTCGCAGCGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAGGCTATTCGCGCAGTTCAACAGCAGCATGGTAATTTAAATTTAAAGCATTTCAGACTGATAAGGAAGCTTGGTAGTGGAGACATCGGAACCGTTTATCTTGCGGAACTAATCGGTACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAATGAATTTTTGGCAAGCAGGAAGAAAACATTTAGGGTTCAAACCGAAAGAGAGATCCTTCAAATGTTGGATCATCCGTTTCTTCCGACACTTTATTCTCATATTAGTACATATAAGCTCTCTTGCTTGGTCATGGAGTATTGTCCGGGCGGTGATCTGCACGTGCTGCGACAGAAGCAAACGTACAAGAGCTTTTCGGAGCATGCAACAAGGTTTTATGTTGCTGAAGTTCTTCTTGCGCTCGAGTATTTGCACATGATGGGAGTTGTTTATCGAGATCTAAAGCCGGAAAACATCCTAGTACGCGAAGATGGACATATAATGCTGACAGATTTCGACTTGTCGCTCAGATGTTCTGTCAATGCAATGATAGTAAAATCATCTTCACCCGACGCAGATGCGGCAAAGAAGTTCTCCGGTTCTTGTTCGGGAACTAGCTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTTTCCTGCTTTACTCCTAATCTTTTGTCTCCGGGAGCGAAATCTCGAAAGATGAAGGCTGACATACAAGCTCAAGTCGGTCCACTGCCGCAACTTGTGGTCGAGCCTACAAGTGCACGGTCCAACTCCTTCGTTGGAACGTACGAGTATCTTGCTCCGGAGATCATCAAAAGCGAGGGCCATGGAAATGCTGTAGATTGGTGGACTTTCGGTATACTTTTGTTCGAGCTTTTATACGGAAAAACTCCCTTCAAAGGTCCATCAAACGACGATACATTATCCAATATCGTGTCGCAGAACCTTACGTTTCCAGGTACTCCTATAGTCAGTTTTCATGCAAGAGACTTGATCAGAGGATTGTTGATGAAGGATCCGGAAAATCGATTAGGTTCCGTAAAAGGTGCTGCGGAGATAAAACAGCATCCTTTCTTCGACGGCCTCAACTGGGCACTAATACGGTGCGCCGCGCCACCTGAGCTCCCGAACTTTCACGATTTCGGTGCTTCGCCTATGGATGGTCATAAGGAAAATGCAAATGATTTAGAGGATATAGATGATTGTGAAGAGTTTGAGCTGTTTTAG 2277 0.4409 MNTSSYTCEIVESREEILPEFEIDEKPESSCSNRLGKRYSIEDDIDRLFQAIEINKGCLSRGHSMSRSQKSALKRPIKVCSTQASGIGIAERVSLKQALRGLCISQASEMAALKRLSKQCGSSRVSEVGTGKKLVEISLVPEVSSSKEMTTRFVSRDQIVPLPLEVEADKPTIQTEEVLEVRPNHATESKFRLGSSNESSVDKPSSISTCLAKSKFNNMNFLKKKVKKDLCSGSSCSTSRFDKKNGNSDLNREVKENDEKLSPCSSNHSIEVNSVNVNRDFSDSKRGFGLNCNKKTKFLLTKVDEKSRWKEKGEFSHSSKSSIGEHSTSSTSISEESNLSSSRRSGQRPHMSKHSRWEAIRAVQQQHGNLNLKHFRLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSHISTYKLSCLVMEYCPGGDLHVLRQKQTYKSFSEHATRFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNAMIVKSSSPDADAAKKFSGSCSGTSCIHPFCLQPDWQVSCFTPNLLSPGAKSRKMKADIQAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGILLFELLYGKTPFKGPSNDDTLSNIVSQNLTFPGTPIVSFHARDLIRGLLMKDPENRLGSVKGAAEIKQHPFFDGLNWALIRCAAPPELPNFHDFGASPMDGHKENANDLEDIDDCEEFELF 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07708 758 Gene3D Phosphorylase Kinase; domain 1 373 454 - -
Vivi3g07708 758 SMART serkin_6 375 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07708 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Vivi3g07708 758 MobiDBLite consensus disorder prediction 320 346 - -
Vivi3g07708 758 FunFam Serine/threonine-protein kinase D6PK-like 373 458 - -
Vivi3g07708 758 MobiDBLite consensus disorder prediction 245 262 - -
Vivi3g07708 758 Gene3D Transferase(Phosphotransferase) domain 1 455 524 - -
Vivi3g07708 758 FunFam serine/threonine-protein kinase D6PK-like 459 526 - -
Vivi3g07708 758 ProSiteProfiles Protein kinase domain profile. 375 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07708 758 MobiDBLite consensus disorder prediction 314 355 - -
Vivi3g07708 758 MobiDBLite consensus disorder prediction 231 267 - -
Vivi3g07708 758 FunFam serine/threonine-protein kinase D6PK-like 604 727 - -
Vivi3g07708 758 CDD STKc_phototropin_like 373 733 - -
Vivi3g07708 758 SUPERFAMILY Protein kinase-like (PK-like) 349 726 IPR011009 -
Vivi3g07708 758 PANTHER FLIPPASE KINASE 1-RELATED 203 728 - -
Vivi3g07708 758 Pfam Protein kinase domain 376 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07708 758 Pfam Protein kinase domain 606 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07708 758 Gene3D Transferase(Phosphotransferase) domain 1 603 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07708 Vivi-Chr3 214058694 214061948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07708 264 758 AGC Kinase Gene Family AT3G52890 61.765 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi3g07708 Pkinase 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07708 - - gmx:100784955 1079.32