Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07701 ATGAACACATCATCAATTCCAGATTGTGTTGATAAATGGGTGAACCATATACATGAACAAAGTATGGAACAAAGCCAAGAAAGTATTGACAAAATTGAGCCTCACTTAGGAATGGAGTTTCTATCTGAAGCAGAGGCTTATGAGTTTTATAATAAATATAGTAAAGGATTTGGGTTTGGTATTCGCCGAGAATATTCAAATAAAAGCCGAATAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTGCTCGAGTTATTGACAAAAGACGCAACCCAACGGGAGAACCTAGAGCAGAAACCAGAACAGGATGTCTAGCACGTATGGTTATTTCACTTGATCGGAAGATTGAGAAATATAAAGTTGTTGACTTTGTAGCTCAACATAACCACCCTCTTTTGCCGCAGGAGTATGTTCATATGATTCGCTCTCATCGACACATTTCTGAGGCACAAGCATCACAAATTATCTTGGGAGAAGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCCAAGCAATCCGGTGGAATAGAGACAGTTGGTTTTACCAGACAAGACCTGAAGAACTTGCTTAAAACCAAAAGGAAGCAATCTCTAAAATACGGTGAAGTGGGTGCATTGATGAGATATTTCAAACAAGAAAGTGAAAATCCATCATTCTTTTATGATTTTCAAATGGATGTTGAAGAACAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATATCGTCACTTTTGACACCACTTACAAGACAAATAAAGATTGTCGACCGTTGGGAGTATTTGTTGGACTTAATAATCATAGGCAAACAATCATTTTTGGGGCAGCATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTGTTTGAAACATTTCTCAAAGCGATGACCCAAAGAAAGCCTAAAACCATTCTAACAGATCAAGATGCTGCAATGGCTAAGGCTATTTCCTTGGTTATGCCAGAAACTTTTCATGGATTGTGCACTTGGCATATAAGACAAAATGCTTTAAGGCATGTGAATCATTTATATCAGAAGAGTTCAAAATTCGGATTGGATTTTGAAGCATGTATAGATCTACACGAAGAGGAAGGTGACTTTTTGAATGCGTGGGATTCTTTACTTGTTGAACATAATGTGCTGGAAGGTTCATGGTTGCATACAATTTTTCAATCAAAGGAAAAATGGGCATGGACTTATGTTCGAAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAAAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCAGATTTAAATTTGGTTCAATTTTTTACTCACTTTAAAAGGGCTGTTAATGGTAAACGGAACAATGAGTCAGAAGCTGAATATGAGTCAATACATAAGTTGCCTAAATTGAAAATGAAGAAGGCTCGTATGCTCATACAAGCCGGAAGTGTTTACACTCCAAGAATTTTTGAGGAATTCCAAGAGGAGTATGAAGAATATCAAGACACTTGTGTAAAGGATTTGAAAGGAGGTTTGTTTGTTGTCACAAATTATGACAATACAAAAGAAAGGATAGTAATGGGAGATCCTATGGAACAAAAAGTTTCTTGTGCTTGTCGTAAATTTGAGACACATGGCATCTTATGTAGTCACGCTTTGAAAGTTCTAGATGTCATGAACATAAAATTAATTCCGGAACAGTATATACTCAAGAGATGGACAAGAGGTGCAAGGTTGGGAAGTAATCAAGATTGGGATGGAAGGCATGTTGAATTAGACATGAAAGCACACTTCATGAAGCGATACAATGAGTTATGTCCTCGAATGATCAAATTGACCAACAGAGCTTCGGAATCACATGAAACTTACACATTTTTGTCCAAAGTCTATGAAGAGTCGAGCAAAATAATTGATGATATGTTAGCAAAAGAATATGTGGATGAAAAATCAAGTGGAATGGTCCATGTATCAATATCAACATCAAGCTAA 2022 0.361 MNTSSIPDCVDKWVNHIHEQSMEQSQESIDKIEPHLGMEFLSEAEAYEFYNKYSKGFGFGIRREYSNKSRIDGVLTSRRFTCFKEGARVIDKRRNPTGEPRAETRTGCLARMVISLDRKIEKYKVVDFVAQHNHPLLPQEYVHMIRSHRHISEAQASQIILGEESGLRPKDLHEYISKQSGGIETVGFTRQDLKNLLKTKRKQSLKYGEVGALMRYFKQESENPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDIVTFDTTYKTNKDCRPLGVFVGLNNHRQTIIFGAALLYDETIPSFQWLFETFLKAMTQRKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQKSSKFGLDFEACIDLHEEEGDFLNAWDSLLVEHNVLEGSWLHTIFQSKEKWAWTYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHFKRAVNGKRNNESEAEYESIHKLPKLKMKKARMLIQAGSVYTPRIFEEFQEEYEEYQDTCVKDLKGGLFVVTNYDNTKERIVMGDPMEQKVSCACRKFETHGILCSHALKVLDVMNIKLIPEQYILKRWTRGARLGSNQDWDGRHVELDMKAHFMKRYNELCPRMIKLTNRASESHETYTFLSKVYEESSKIIDDMLAKEYVDEKSSGMVHVSISTSS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07701 673 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Vivi3g07701 673 Pfam MULE transposase domain 258 352 IPR018289 -
Vivi3g07701 673 ProSiteProfiles Zinc finger SWIM-type profile. 524 571 IPR007527 GO:0008270
Vivi3g07701 673 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 646 IPR031052 GO:0006355
Vivi3g07701 673 ProSiteProfiles WRKY domain profile. 84 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07701 673 SMART 26again6 546 573 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07701 Vivi-Chr3 213911112 213913207 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07701 MULE 2.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07701 - - tpra:123895462 1120.53