Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07676 ATGGCTGGGATTGATGAAAATGTTGGGCTTAATGGTGATTGGGGTCTTCCGAATTCGAATCCGAGTCCGAGAACCCTATTTTCTAGAATGCTAGATGAAGAGAGTGATAATGTAACAAGACAAATCTCTGAACAATCTGAGAGTGATAGAATTGAGGTACAAGACGGTGATTCGGGTACTCAATTGAGCGATGCGAGTTATCGAGCTGATAATAAGTTGAACTCGCGAGGGGGTCTTGTTGAAAGAATTGCTGCGAGAACCGGGTTTAATGCGCCGAGGTTGAATACAGAAGGCATTAGATCTACTGAACTTTCGCTCAATTCGGAGATTCAGTCTCCGTATTTGACTATACCGCCCGGTCTTAGTCCTACTACACTTTTGGATTCTCCTGTTTTCCTTGCGAATTCGTTGGCACAACCATCTCCGACAACGGGAAAGTTTCCTTTTGTCTCGAACGGAAATATCCGCGGCACAGAATTATGTTCGGATGATCAACAAAAATCTAAACTTAATGGCTTTAGTGATATGTATGGCTCATCCTTTGCTTTCAAGCCTACGCCCGATTCAGGACCCTCTTTTTATCACGGTGCTGGTAGAAAAATGAATCAAACTACACTTCCTCAGCAAACCCTTCACGGTTTTGAAGCTTCGGTTCAATCTCAAAGAGTTGATGCGACTGAGAACAAAAGTAGCCACCATCTTAAGGCGGAATTCTCCGACTCGCCGCCTCAAAAAGACAATTCTGCACCGATGGAAGAGCAAGCAGATGAAGAGGGGGAACAAAGAGTCAACGGAGACACAATTGTTGCTGGTGTTGGTGGTACTCCGTCGGAAGATGGATATAATTGGAGAAAATACGGTCAAAAGCAAGTTAAGGGTAGCGAGTTTCCGCGAAGTTACTACAAATGCACCCATTCGAATTGTCCGGTTAAAAAGAAAGTTGAACGTTCTCACGAGGGCCACATAACGGAGATCATCTATAAGGGAGCACACAACCACCCGAAACCTCCTCCGAGTCGCCGGTCAGGCATAGGGTCAGCTAATCCTCACGCCGACATGCAAGTGGACAATCCTGAACATGTTGAAGCACAGGGAAATATAGCTAACTGGAAGCCGGAAAACCTTGAAGCGACATCGGCTGCATCTGCTATTGCTGAGTACGGCAACCAGTCCACCAATCTGCAAACTCAAAACGGTATTACTCACTTAGATTCAGGTGATGCCGTGGATGGCTCGTCCACTTTTTCTAATGAAGAAGAGGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGTTACGATGCGGAAGGAGATGAATCCGAGTCTAAGAGAAGGAAACTGGAATCGTATGCTGAGATGAGTGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTGCAGACTACCAGCGAAGTCGATATCCTCGATGATGGTTATAGGTGGCGGAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCGCATGACCTTAAATCTGTGATCACCACATACGAGGGAAAGCACAATCACGATGTCCCCGCTGCTCGTTCCAGCAGTCACGTCAATGCGAACAACGCTTCTAACGCAGGTCAAGGGCAAGCTCCTGGTCTTCTTCAAAACCATGCTCATAGAACTGAACCATCTCAAATTCACAACGCAATGGGAAGGCCTTCGCTCGGCTCATTCAACTTTCACGGAAGACAGCAGCTAGCTCATCCGCACGGCTTCTCCTTCGGCATGAATCAACACCTCTCCAACCTTGCAATGTCTGGTTTAGGCCCCTCTTCACGAATGCCTATGAATCCATTCATGGCGCAACAACAACAACATCAGCAACATCAGCAACAACAACAACAGCGTGCCGCAAATGAAATGGGCTTCATGTTACCAAAGGGAGAACCAAATATGGACGCAAATCCTGAACGCGGAAGCCTTAACATGCAAAACGGTGCATCGTCGATGTATCAAGATATTATGAATCACATGCCTCTCGGACCTCACATGTAA 2079 0.4651 MAGIDENVGLNGDWGLPNSNPSPRTLFSRMLDEESDNVTRQISEQSESDRIEVQDGDSGTQLSDASYRADNKLNSRGGLVERIAARTGFNAPRLNTEGIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSNGNIRGTELCSDDQQKSKLNGFSDMYGSSFAFKPTPDSGPSFYHGAGRKMNQTTLPQQTLHGFEASVQSQRVDATENKSSHHLKAEFSDSPPQKDNSAPMEEQADEEGEQRVNGDTIVAGVGGTPSEDGYNWRKYGQKQVKGSEFPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSANPHADMQVDNPEHVEAQGNIANWKPENLEATSAASAIAEYGNQSTNLQTQNGITHLDSGDAVDGSSTFSNEEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANNASNAGQGQAPGLLQNHAHRTEPSQIHNAMGRPSLGSFNFHGRQQLAHPHGFSFGMNQHLSNLAMSGLGPSSRMPMNPFMAQQQQHQQHQQQQQQRAANEMGFMLPKGEPNMDANPERGSLNMQNGASSMYQDIMNHMPLGPHM 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07676 692 Gene3D WRKY domain 464 530 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 1 69 - -
Vivi3g07676 692 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 437 452 - -
Vivi3g07676 692 SMART WRKY_cls 477 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 SMART WRKY_cls 277 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 226 240 - -
Vivi3g07676 692 ProSiteProfiles WRKY domain profile. 472 537 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 396 413 - -
Vivi3g07676 692 FunFam WRKY transcription factor 33 464 530 - -
Vivi3g07676 692 MobiDBLite consensus disorder prediction 396 454 - -
Vivi3g07676 692 ProSiteProfiles WRKY domain profile. 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 SUPERFAMILY WRKY DNA-binding domain 469 537 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 219 283 - -
Vivi3g07676 692 MobiDBLite consensus disorder prediction 328 354 - -
Vivi3g07676 692 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 568 IPR044810 GO:0003700
Vivi3g07676 692 MobiDBLite consensus disorder prediction 624 646 - -
Vivi3g07676 692 FunFam WRKY transcription factor 268 337 - -
Vivi3g07676 692 MobiDBLite consensus disorder prediction 531 560 - -
Vivi3g07676 692 MobiDBLite consensus disorder prediction 55 69 - -
Vivi3g07676 692 Gene3D WRKY domain 270 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 29 54 - -
Vivi3g07676 692 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 Pfam WRKY DNA -binding domain 478 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g07676 692 MobiDBLite consensus disorder prediction 539 559 - -
Vivi3g07676 692 MobiDBLite consensus disorder prediction 611 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07676 Vivi-Chr3 213655787 213659402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07676 1 687 WRKY Transcription Factor Family AT5G56270 48.509 5.88e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g07676 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07676 K18835 - gmx:100127395 966.452