Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07675 ATGTCATGTAGATTTTCATGTGTTTTTGTTCTTCTTCATGTCTTTGTTTCATTCTTCACACTAACCTTAACTTCATCAACAACCTTAACAACATCAAAAACAACAACCTTTGATTCAACAACGTTGTTAAACAATTTCAAACACTCCAACATCATTTCTGACCCAAAAAACTTCCTTTCAAATTGGTCACTTTCATCCTCACCTTGTTCCTGGCAAGGTATCACTTGCTCCATCTCCGGCGAAATCACCACCGTGAACCTCACCGGAGCTTCACTTTCCGGCAACATCTTCAACCTTTTTACTTTCACTTCAATACCTTCTTTACAACACCTTCTCTTACATGGAAACTTTTTCACTTCTTTCAACTTGTCTCTCTCAAATTCACAGCCTTGTTCTCTTGTGACTCTTGATATTTCCTCAACCAATTTCTCAGGAATTTTCCCTTTTGATGATGTTGTTGTTTCTTGTTATAATCTCAGTTACTTGAACTTGTCTATGAATTTGATTACTGGATCAAATTATAGCTTGTTAGGGTTTGATAATAATGGTGGTTTTTCTTCTTCTTTGATTCAACTTGACATGTCTAGAAACATGTTTTCTGATGTTGGTTTTGTTATGCATGTTGTTACAAAGTTTGAAAGTTTGGTTTTTGTGAATTTCTCTAATAACAGAATCTATGGTGAATTGACTGAATTCAGTGATGATTCTCTTGTTCCTTCTGTGAGTTTGGTGAGTTTGGATTTGTCTCATAATTTGTTGTTTGGGAAGTTGCCTTATAGGATTGTTGGCGATAGTGTCGAAAGATTGGATCTTTCGAGCAATAATTTTTCGTTAGGGTTTTCGGAGTTCGAATTCGGGGATTGTAAGAAGCTTGTTTGGTTGAGTTTATCTCACAATGTGATATCTGATTTTGAGTTTCCTCAGAGTTTGAGGAATTGTCAAAAGATGGAAAGTTTGGATCTTTCTCGAAATCGGTTTAAGATGAAGATGAAGATTCCGGGTTTTGTTATAGGCGCGTTGAGGAATTTGAAGAGGCTTTATTTAGGGAATAATCTTTTTTATGGCGAAATACCGAATGAGCTTGGAAGTGTTTGTGGGAGTTTGGAGATTCTTGATCTTTCTGTGAACAAGCTTTCTGGCGGGTTTCCGTCGGTTTTTGGAAATTGTTTATCTTTGAAGATTCTTAACTTGACTAAGAATTATCTCTATGGTGATTTCCTCGATACCGTTGTTAGCAAGCTTTCAAATCTTAGGTATCTGTCGGTGTCGTTCAACAACATAACCGGGAATGTTCCTTTGTCGATTGTTGAAAACTGTACGGAACTTCAAGTTCTTGATCTAAGTGCGAACGGTTTCTCCGGGAATGTTCATTCGATATTCTGTCCTTCGAAATTGGAGAAGTTGCTTATAGCGGATAATTATCTTTCGGGGAACGTTCCTGCGAAACTCGGCGAATGCAAGAGTTTGAAGACTATTGATTTCAGCTTCAATAATTTGAGTGGTTCGATACCTTTGGAAGTTTGGTTTTTGCCTAATCTGTCTGACTTGATCATGTGGGCGAATAGTCTCACCGGCGAGATTCCGGATGGAATTTGCGTCAACGGAGGGAACCTCGAGACGTTGATTCTTAACAACAATTTCATTTCTGGTTCGATTCCTAAGTCTATTGTGAACTGTACTAACATGATTTGGGTTTCGCTAGCTAACAACCGCATTACCGGAGAAATACCTGTTGGTATCGGGAATCTGAACGAACTCGCTATTCTCCAATTAGGTAACAATTTGCTCGTCGGGAATATTCCTCCCGACATTGGAATGTGCAAGAGACTAATATGGTTGGATTTGACTAGCAATAATCTCACCGGGCCTATTCCGTCCGAGCTCACGAACCAAGCTGGTTTGGTTGTTCCGGGGAGAGTTTCCGGTAAACAATTTGTATTTGTGAGAAATGAAGGCGGAACTAATTGCAGAGGCGCCGGCGGACTCGTCGAGTTTGAAGGTATAAGGGTGGAGAGGCTCGAAAATTTTCCTATGGTACATTCTTGTACGTTAACTAGAATATATTCGGGTTATACCGTTTATACTTTTACCAATCATGGAAGCATGATCTACCTCGATCTTTCCTACAATTTCTTGTCGGGGACTATTCCGGGAAGTTTCGGTGCAATGTCATATTTGCAGGTCTTAAATCTCGGACACAATCGGCTCGATGGAAAAATTCCAGACACTTTCGGTCTTTTAAAAGCTATAGGAGTTCTTGATTTATCGCATAATAGCCTTCATGGATTCATACCTGGATCGTTACAGTCTCTATCGTTTCTGAGTGATTTCGATGTGTCGAATAATAACCTCAGCGGTTCGATTCCTTCTGGAGGTCAGCTGACAACTTTCCCGGCGTCTCGATACGCGAACAACTCTGGCCTTTGCGGTGTTCCGTTACCGCAATGCAGTGCTTCAAATCACTCGGTAGGTTATAATTCGGGGAAGAAGAAGAAGACGCAATCGATTGCAGTTTTGGGTGGCATTTCCGTCCTTTTCTTCCTCTTGTTTATCGTTGTCGTTTTATTGGCTTTATACAGAGTTCGAAAGGTGCGGAAGAAGGACGAATTGAGAGAAAAATACATGGAAAGTCTTCCAACTTCCGGTACCAATAGTTGGAAGCTTTCCGGCTTCCGTGAGCCTCTGAGCATCAATGTCGCTACGTTCGAGAAGCCTTTGCGAAAGTTGACGTTCGCGCATCTTCTCGAGGCTACAAACGGTTTCAGCTCCGAAAGCTTGATAGGTTCGGGAGGTTTCGGCGAAGTCTATAAAGCTAAGATGAAAGACGGTAGTGTCGTCGCAATCAAGAAACTCATTCATGTCACAGGTCAGGGAGACAGAGAGTTCATGGCCGAAATGGAAACGATCGGGAAGATTAAACACCGGAACCTCGTTCCGCTTCTCGGTTACTGTAAAGTCGGAGACGAGAGGCTCCTTGTTTACGAGTACATGAAATATGGAAGTCTCGAAACTGTTCTACACGAGAGAACCAAAAATTCGAAGCTTACTTGGGAAACAAGAAAGAACATCGCACTAGGATCGGCGAGAGGTCTCGCATTTCTTCATCATAGTTGCATACCTCATATCATACACAGAGACATGAAATCCAGCAACATTCTTCTCGACGAAAATTTCGAGGCTAGAGTATCGGATTTCGGTATGGCGAGATTGGTTAATGCTCTCGACACACATCTCACAGTCAGCACGCTTGCAGGAACACCAGGCTATGTACCACCGGAATACTACCAGAGTTTCCGATGCACGGCAAAAGGCGATGTTTATAGTTACGGTGTCATATTGCTAGAGCTTCTATCAGGTAAGAGACCGATCGACTCATCCGAGTTCGGCGACGATAACAATCTTGTCGGATGGTCGAAGAAGCTTTATCGAGAGAGAAGAGTCAGTGAAATACTCGATCCTGATTTGGTTTCGCAAACATCTAGCGAAGGCGAACTGCTTCAATATTTGAGAATTGCTTTTGAATGTTTGGAGGAAAGACCGTACCGGCGGCCGACGATGATACAAGTGATGGCAATGTTTAAAGAGCTTCAAGCTGTTGATACAGATGATGATAGTGTTGTTGAGGGTTTCTCTATGAAAGACAATGTGATTGATGAAGCATGA 3663 0.4158 MSCRFSCVFVLLHVFVSFFTLTLTSSTTLTTSKTTTFDSTTLLNNFKHSNIISDPKNFLSNWSLSSSPCSWQGITCSISGEITTVNLTGASLSGNIFNLFTFTSIPSLQHLLLHGNFFTSFNLSLSNSQPCSLVTLDISSTNFSGIFPFDDVVVSCYNLSYLNLSMNLITGSNYSLLGFDNNGGFSSSLIQLDMSRNMFSDVGFVMHVVTKFESLVFVNFSNNRIYGELTEFSDDSLVPSVSLVSLDLSHNLLFGKLPYRIVGDSVERLDLSSNNFSLGFSEFEFGDCKKLVWLSLSHNVISDFEFPQSLRNCQKMESLDLSRNRFKMKMKIPGFVIGALRNLKRLYLGNNLFYGEIPNELGSVCGSLEILDLSVNKLSGGFPSVFGNCLSLKILNLTKNYLYGDFLDTVVSKLSNLRYLSVSFNNITGNVPLSIVENCTELQVLDLSANGFSGNVHSIFCPSKLEKLLIADNYLSGNVPAKLGECKSLKTIDFSFNNLSGSIPLEVWFLPNLSDLIMWANSLTGEIPDGICVNGGNLETLILNNNFISGSIPKSIVNCTNMIWVSLANNRITGEIPVGIGNLNELAILQLGNNLLVGNIPPDIGMCKRLIWLDLTSNNLTGPIPSELTNQAGLVVPGRVSGKQFVFVRNEGGTNCRGAGGLVEFEGIRVERLENFPMVHSCTLTRIYSGYTVYTFTNHGSMIYLDLSYNFLSGTIPGSFGAMSYLQVLNLGHNRLDGKIPDTFGLLKAIGVLDLSHNSLHGFIPGSLQSLSFLSDFDVSNNNLSGSIPSGGQLTTFPASRYANNSGLCGVPLPQCSASNHSVGYNSGKKKKTQSIAVLGGISVLFFLLFIVVVLLALYRVRKVRKKDELREKYMESLPTSGTNSWKLSGFREPLSINVATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAKMKDGSVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEYMKYGSLETVLHERTKNSKLTWETRKNIALGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWSKKLYRERRVSEILDPDLVSQTSSEGELLQYLRIAFECLEERPYRRPTMIQVMAMFKELQAVDTDDDSVVEGFSMKDNVIDEA 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07675 1220 ProSitePatterns Protein kinases ATP-binding region signature. 927 950 IPR017441 GO:0005524
Vivi3g07675 1220 FunFam Brassinosteroid LRR receptor kinase 997 1198 - -
Vivi3g07675 1220 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 182 464 - -
Vivi3g07675 1220 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1042 1054 IPR008271 GO:0004672|GO:0006468
Vivi3g07675 1220 SUPERFAMILY L domain-like 268 630 - -
Vivi3g07675 1220 FunFam Serine/threonine-protein kinase BRI1-like 1 640 697 - -
Vivi3g07675 1220 SUPERFAMILY L domain-like 42 379 - -
Vivi3g07675 1220 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 694 816 - -
Vivi3g07675 1220 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Vivi3g07675 1220 SUPERFAMILY Protein kinase-like (PK-like) 905 1198 IPR011009 -
Vivi3g07675 1220 Pfam Brassinosteroid receptor island domain 633 697 IPR045381 -
Vivi3g07675 1220 Gene3D - 640 697 - -
Vivi3g07675 1220 Gene3D Ribonuclease Inhibitor 33 177 IPR032675 -
Vivi3g07675 1220 Pfam Leucine rich repeat N-terminal domain 43 77 IPR013210 -
Vivi3g07675 1220 ProSiteProfiles Protein kinase domain profile. 921 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07675 1220 SUPERFAMILY L domain-like 693 819 - -
Vivi3g07675 1220 Gene3D Phosphorylase Kinase; domain 1 884 996 - -
Vivi3g07675 1220 SMART serkin_6 921 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07675 1220 Gene3D Ribonuclease Inhibitor 184 817 IPR032675 -
Vivi3g07675 1220 Pfam Leucine Rich Repeat 537 559 IPR001611 GO:0005515
Vivi3g07675 1220 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 512 1197 - -
Vivi3g07675 1220 Pfam Leucine rich repeat 725 784 IPR001611 GO:0005515
Vivi3g07675 1220 Pfam Leucine rich repeat 265 326 IPR001611 GO:0005515
Vivi3g07675 1220 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 532 624 - -
Vivi3g07675 1220 Gene3D Transferase(Phosphotransferase) domain 1 997 1214 - -
Vivi3g07675 1220 FunFam serine/threonine-protein kinase BRI1-like 2 882 996 - -
Vivi3g07675 1220 SMART LRR_typ_2 583 607 IPR003591 -
Vivi3g07675 1220 SMART LRR_typ_2 723 746 IPR003591 -
Vivi3g07675 1220 SMART LRR_typ_2 340 364 IPR003591 -
Vivi3g07675 1220 SMART LRR_typ_2 510 534 IPR003591 -
Vivi3g07675 1220 SMART LRR_typ_2 414 438 IPR003591 -
Vivi3g07675 1220 SMART LRR_typ_2 747 770 IPR003591 -
Vivi3g07675 1220 Pfam Protein kinase domain 922 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07675 Vivi-Chr3 213634920 213638813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07675 11 1219 Receptor kinase-like Gene Family AT1G55610 59.869 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Vivi3g07675 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07675 - - gmx:100779072 1584.31