Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07671 ATGGCGATGCGCGATCTCATCACCGGTGCTACTTCTTGCCCTGATCCTTCCGCTTCGTCTTCCTCGCAAAACCCTCTCGCTTCTCTCGCGAATGTTCTCACCGGTTCTATCGCCAAGACTCAGGAGGGATTGAGGGAAATTCCTACTGCGAATTCTACTGGTTCGGCGTCGCAAATTTACTCCGAGCAGCGTAATCAGCTTCCTGGTTTGGAATTCGATAAACCTTTAATCGAGGCGAATTCTCAGGGTTCAGAGTTTTATAATAAATTTAGGTCTGCGGGTGCGGGTGGGTTTGAGGAAACGTGGGGTGAGATTCAACGTGATGGAAGTCAACTTCCGCTCTATGATGGTAGGGGACAGCTTCCACCACAGCTTCATCAACCTGCATTGGATGGGACACCGCAAAGAGTTCTTTCTACCTTTTTGCACTCATTTCTTGACAGCAGTCGTGGTGGAATACCTTTCCATCCCGCCTCTCTTCCAGTATTGGGTCTATCTGAAGGTGATAAACAATGTATACGTGACCGTAGCAGCATAATGGCCAGACATCTCTTTGCAGATAAAAGCGATGAATTTATCCATGCCCAAGTAAATGCTCTGCTGTACTCTCTAGATATTGACAGCAATGTCCGTGGCAAGGGACCTATGCCTGAAAGATTTAGGGAGCTTGATGATTATTGGAACGAGTCTCAAGGCAACATGATACAAGGTGCTCATGCTTCAGATGGATGGATTTCTGAATACGGTCAAAATAGAGAAAGATATGATAATCCTGATGCATGGGCTAACTCATTTGAGCAACAACATGGTGTAACTGGTTGGGTCTCTGAATTTGAACATTCTCAATTGTCATCAGTAGATCAAATGCGAGGTATGAACATGCAAAATATTGCTGCAATGGAGCAGACTCGTATGCTTGCAAACACACTGGCCCAGAATGCTGACCCTAAATTTCAGAACTCGAAGTTCTTTCAATTTGTATCCAAGATGAGCCGCGGCGAGTTGATTATCGATGACAATCAAGTTAAAGAAACTGCATTACCTGCACCTGGAGATTGGGCATCAGAATATCAGCAACAGTATAATCATGGTGATGCATGGGCTGGTGAATTCGTAAATAATAAGGCTTTTTCTGGAGTTAGACCTGAACAGTGGGCAAATGAGTTTGCAACCGAAAGACAACAAATTGGAGCAGTTGATGACCAGTGGGTTGATGAATTCTCAAATTTGCGTGTTAATGACGACTGGGCAGAGGAATTTGGTCAGCAGGTTGGTGAAGGAGCCTTTGGGGAAGACTCTTCGAATAATTGGGCTCAAGCATATGACGAGTTCCTGAATGAGCAAAATGCTGCCAAAGAGCGGTCAGATAGTTCAAGGGGTGTGTATGTCTTTTCAGATTTAAATCCTTATGTTGGCCATCCAAATCCACTAAAAGAAGGCCAAGATCTCTTCAGAAAGGGGCTTTTAAGTGAAGCAGTTCTTGCACTAGAAGCTGAAGTCTTGAAAAGCCCTGAAAATGCCGAAGGATGGAGACTACTCGGAATAGCGCATGCAGAAAATGATGATGATCAACAGGCGATTGCAGCGATGATGCGTGCACAGGAGGCTGATCCAACAAACTTGGAGGTGCTTCTTGCTCTTGGTGTCAGTCATACAAATGAACTGGAGCAAAATGCCGCATTGAAGTATCTATTTGGATGGCTACGACATCACCCAAAATATGGAACAATTGCCCCACCTGAGATGTCTGATTCTTTGTACTATGCTGATGTTGCCAGATTATACAACGAAGCAGCTGTAATGTCACCTGATGATGCTGATGTTCACATAGTTCTTGGGGTCCTGTACAACTTGTCCAGAGAATACGATAAAGCCATTGAAGCTTTTGAACGGGCATTGAAACTTAAACCACAAGATTACTCTCTCTGGAACAAGCTTGGTGCAACACAAGCTAATAGTGTTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCGCTAGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAATCAGGGCATGTATGACGAGTCTGTTCGTTATTATGTTCGAGCGCTTGCCATGAATCCAAAAGCAGAGAACGCATGGCAATATTTGAGAATTTCATTGAGTTGCGCTTCCAGGAATGACATGTTAGAAGCTTGCGATAGTCGTAATTTGGACCTTCTCCAGAAGGAATTCCCTCTGCAATAA 2238 0.4415 MAMRDLITGATSCPDPSASSSSQNPLASLANVLTGSIAKTQEGLREIPTANSTGSASQIYSEQRNQLPGLEFDKPLIEANSQGSEFYNKFRSAGAGGFEETWGEIQRDGSQLPLYDGRGQLPPQLHQPALDGTPQRVLSTFLHSFLDSSRGGIPFHPASLPVLGLSEGDKQCIRDRSSIMARHLFADKSDEFIHAQVNALLYSLDIDSNVRGKGPMPERFRELDDYWNESQGNMIQGAHASDGWISEYGQNRERYDNPDAWANSFEQQHGVTGWVSEFEHSQLSSVDQMRGMNMQNIAAMEQTRMLANTLAQNADPKFQNSKFFQFVSKMSRGELIIDDNQVKETALPAPGDWASEYQQQYNHGDAWAGEFVNNKAFSGVRPEQWANEFATERQQIGAVDDQWVDEFSNLRVNDDWAEEFGQQVGEGAFGEDSSNNWAQAYDEFLNEQNAAKERSDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKSPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELEQNAALKYLFGWLRHHPKYGTIAPPEMSDSLYYADVARLYNEAAVMSPDDADVHIVLGVLYNLSREYDKAIEAFERALKLKPQDYSLWNKLGATQANSVQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESVRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07671 745 ProSiteProfiles TPR repeat region circular profile. 674 706 - -
Vivi3g07671 745 FunFam Peroxisome biogenesis protein 5 456 744 - -
Vivi3g07671 745 Gene3D Tetratricopeptide repeat domain 456 745 IPR011990 GO:0005515
Vivi3g07671 745 ProSiteProfiles TPR repeat profile. 606 639 IPR019734 GO:0005515
Vivi3g07671 745 ProSiteProfiles TPR repeat profile. 674 707 IPR019734 GO:0005515
Vivi3g07671 745 ProSiteProfiles TPR repeat region circular profile. 606 639 - -
Vivi3g07671 745 ProSiteProfiles TPR repeat profile. 507 540 IPR019734 GO:0005515
Vivi3g07671 745 SMART tpr_5 507 540 IPR019734 GO:0005515
Vivi3g07671 745 SMART tpr_5 674 707 IPR019734 GO:0005515
Vivi3g07671 745 SMART tpr_5 640 673 IPR019734 GO:0005515
Vivi3g07671 745 SMART tpr_5 606 639 IPR019734 GO:0005515
Vivi3g07671 745 MobiDBLite consensus disorder prediction 1 24 - -
Vivi3g07671 745 Pfam Tetratricopeptide repeat 606 639 IPR001440 GO:0005515
Vivi3g07671 745 Pfam Tetratricopeptide repeat 675 706 IPR001440 GO:0005515
Vivi3g07671 745 Pfam Tetratricopeptide repeat 477 539 - -
Vivi3g07671 745 SUPERFAMILY TPR-like 458 744 IPR011990 GO:0005515
Vivi3g07671 745 ProSiteProfiles TPR repeat profile. 640 673 IPR019734 GO:0005515
Vivi3g07671 745 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 742 IPR024111 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07671 619 737 Glycosyltransferase AT3G04240 31.092 4.53e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07671 K13342 - gmx:100527272 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07671 3 213479765 213489740 Vivi3g07671 3 213479765 213489740 ECH