Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07667 ATGGCAACAATGTTCACTCTTCTTTTCCTTCTAATTTCTCTTCTCTCTATAGCAACATCAACACCAACAAGTTTCATCAAATCCTCATGTAGCACAACACAATACCCAACACTTTGTGTTCAATCTCTCTCTGTCTATGCTTCAACAATCCAACAAGACCCTCACCAACTAGTCCAAACAGCTCTATCCCTTAGTCTCAACAAAACTCAATCCACAAAAGGCTTTGTCACAATGTGCAAGAGCTTCAAGAATCTCAAACCAAGAGAATATGCTGCTCTTCATGATTGTGCTGAGGAAATTAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTCAACTTTGTAAGATTAAGGGTCAAGATTTCAATTGGCATATAAGCAATGTTGAGACATGGGTTAGCTCAGCTTTGACTGATGAAAGCACTTGTGGTGATGGATTTAGTGGAAAAGCACTTGATGGAAAAATCAAAGCCTCTATTAGATCTAGAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATAAATCAATATGCTGCTAATCACTAG 564 0.3794 MATMFTLLFLLISLLSIATSTPTSFIKSSCSTTQYPTLCVQSLSVYASTIQQDPHQLVQTALSLSLNKTQSTKGFVTMCKSFKNLKPREYAALHDCAEEISDSVDRLSRSLKELQLCKIKGQDFNWHISNVETWVSSALTDESTCGDGFSGKALDGKIKASIRSRMVNVAQVTSNALSLINQYAANH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07667 187 Pfam Plant invertase/pectin methylesterase inhibitor 24 179 IPR006501 GO:0004857
Vivi3g07667 187 FunFam Pectin methylesterase inhibitor 1 21 183 - -
Vivi3g07667 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 183 IPR035513 -
Vivi3g07667 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 179 - -
Vivi3g07667 187 CDD PMEI-like_3 28 185 - -
Vivi3g07667 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 183 IPR035513 -
Vivi3g07667 187 NCBIfam pectinesterase inhibitor domain 1 183 IPR006501 GO:0004857
Vivi3g07667 187 SMART PMEI_2 21 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07667 Vivi-Chr3 213404327 213405139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07667 19 180 Carbohydrate Esterase AT3G14310 30.909 2.65e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07667 - - lja:Lj0g3v0070759.1 297.745