Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07666 ATGGCAAAGCTTACTCTTCTATTCCTTCTCCTATCTCTACTCTCTATAGCAACATCAACACCAACAAGTTTCATAAAATCCTCATGTAGCACAACACAATATCCAACACTTTGTGTTGAATCTCTCTCTATCTATGCATCAACAATCCAACAAGACCCTCACCAACTAGTCCAAACAGCTCTATCCCTTAGCCTCAACAAAACTCAATCCACAAAAGGCTTTGTCACAATGTGCAAAAGCTTCAAGAATCTAAAACCAAGAGAATATGCTGCTCTTCATGATTGTGCTGAGGAAATTAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAAAGAGCTTCAACTTTGCAAGATTAAGGGTCAAGATTTCAATTGGCATATAAGCAATGTTGAGACATGGGTTAGCTCAGCTTTGACTGATGAAAGCACTTGTGGTGATGGATTTGGTGGAAAAGCACTTGATGGAAAAATCAAAGCCTCTATTAGATCTAGAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTCATTAATCAATATGCTACTTATCACTAG 561 0.3797 MAKLTLLFLLLSLLSIATSTPTSFIKSSCSTTQYPTLCVESLSIYASTIQQDPHQLVQTALSLSLNKTQSTKGFVTMCKSFKNLKPREYAALHDCAEEISDSVDRLSRSLKELQLCKIKGQDFNWHISNVETWVSSALTDESTCGDGFGGKALDGKIKASIRSRMVNVAQVTSNALSLINQYATYH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07666 186 Pfam Plant invertase/pectin methylesterase inhibitor 23 178 IPR006501 GO:0004857
Vivi3g07666 186 NCBIfam pectinesterase inhibitor domain 4 182 IPR006501 GO:0004857
Vivi3g07666 186 CDD PMEI-like_3 27 184 - -
Vivi3g07666 186 SMART PMEI_2 20 178 IPR006501 GO:0004857
Vivi3g07666 186 FunFam Pectin methylesterase inhibitor 1 20 182 - -
Vivi3g07666 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 182 IPR035513 -
Vivi3g07666 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 182 IPR035513 -
Vivi3g07666 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07666 Vivi-Chr3 213388390 213389000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07666 18 179 Carbohydrate Esterase AT3G14310 30.303 2.34e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07666 - - lja:Lj0g3v0070759.1 292.737