Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07665 ATGATTCTCACAAATCACAACCAAATATCAACCTTCAAAACCAACATGGCGAAGTTTACCCTTCTTTTCCTTCTCCTTGCTCTACTCTCAATGGCAACATCAACACCAACAAACTTCATCAAATCCTCATGTAGCACAACACCATATCCAACACTTTGTGTTGAATCTCTTTCTGTCTATGCAACAACAATCCAACAAGATCCACACCAATTAGTCCTAACAGCATTATCACTTAGCCTCAACAAAACTCAATCCACAAAAGGCTTTGTTACTATGTGCAACACCTTCAAAAATCTAAAACCAATAGAATATGCTGCTCTTCATGATTGTTCTGAAGAAATTAGTGATAGTGTTGATAGGCTTAGCCGTTCATTGAATGAGCTTAAACTTTGCAAGATCAATGGTCAAGATTTCAATTGGCATATAAGCAATGTTGAGACATGGGTTAGCTCAGCTTTAACTGATGAAAGCACTTGTGGTAATGGATTTGGTGGAAAAGCACTTGATGGAAGAATCAAAGCCTCTATTAGATCAAGAATGGTTCATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTTATTGATCAATATGCTGCTAATCACATGGAAGAAATTAATTAA 621 0.3655 MILTNHNQISTFKTNMAKFTLLFLLLALLSMATSTPTNFIKSSCSTTPYPTLCVESLSVYATTIQQDPHQLVLTALSLSLNKTQSTKGFVTMCNTFKNLKPIEYAALHDCSEEISDSVDRLSRSLNELKLCKINGQDFNWHISNVETWVSSALTDESTCGNGFGGKALDGRIKASIRSRMVHVAQVTSNALSLIDQYAANHMEEIN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07665 206 NCBIfam pectinesterase inhibitor domain 20 197 IPR006501 GO:0004857
Vivi3g07665 206 FunFam Pectin methylesterase inhibitor 1 35 197 - -
Vivi3g07665 206 Pfam Plant invertase/pectin methylesterase inhibitor 38 193 IPR006501 GO:0004857
Vivi3g07665 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 196 IPR035513 -
Vivi3g07665 206 CDD PMEI-like_3 42 199 - -
Vivi3g07665 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 197 IPR035513 -
Vivi3g07665 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 193 - -
Vivi3g07665 206 SMART PMEI_2 35 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07665 Vivi-Chr3 213341607 213342379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07665 40 194 Carbohydrate Esterase AT3G14310 31.646 3.90e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07665 - - lja:Lj0g3v0070759.1 280.411