Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07663 ATGGAAGCCAACACATTTGCAATCTTCATCTTCTTAGCAATATCGAGCATCACTTTAGCATGTGATGAAAAAAATTCTACAATCTCTACAAATTCCACCAAAACCAACATTTCATACACTTCCAAACCTCCCTTAAACTCCACCCAAAAAAATAATTTCAAAACCTTTATTAAAAATTCTTGCAACTCAACCACATACCCTTACATATGCTACAAATCTTTGTCCCCATATGCTACAAAAATAGAAGAAGACCCTCTAAAATTATGCAACTTCTCGCTCTCGGCCGCGCTAAAGGCGGCCCGTGGCGCGTCATCTGCCGTGTCAAAGCTATTAAAAAATAATGAGAATCATTTGTCAAGCATTGGTGAAGAAGTTGTGCAAGATTGCTTTGGAAATTTGGAGGACTCAATTGAACAATTGCAAGATTCTATTGATGCTATGACACATTTGGATGCTGATTTTGATAGAGAATTTCAGATTAGTAACATAAAGACTTGGGTTAGTTCTGCCATTACTAATGATCAAACTTGCTATGATGGGTTTGATGAGATGAATGTGGATTCAACACTTAGGGATAAAATTAGAAGAACGGTTTTGAATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTTATCAACAATAATATGAATTAA 654 0.3593 MEANTFAIFIFLAISSITLACDEKNSTISTNSTKTNISYTSKPPLNSTQKNNFKTFIKNSCNSTTYPYICYKSLSPYATKIEEDPLKLCNFSLSAALKAARGASSAVSKLLKNNENHLSSIGEEVVQDCFGNLEDSIEQLQDSIDAMTHLDADFDREFQISNIKTWVSSAITNDQTCYDGFDEMNVDSTLRDKIRRTVLNVARKTSNALYFINNNMN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07663 217 CDD PMEI-like_3 60 214 - -
Vivi3g07663 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 215 IPR035513 -
Vivi3g07663 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 214 IPR035513 -
Vivi3g07663 217 SMART PMEI_2 52 211 IPR006501 GO:0004857
Vivi3g07663 217 Pfam Plant invertase/pectin methylesterase inhibitor 56 209 IPR006501 GO:0004857
Vivi3g07663 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 209 - -
Vivi3g07663 217 FunFam Pectinesterase 53 216 - -
Vivi3g07663 217 NCBIfam pectinesterase inhibitor domain 42 214 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07663 Vivi-Chr3 213326114 213326827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07663 57 214 Carbohydrate Esterase AT1G53830 26.582 8.80e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07663 - - gmx:100527443 249.98