Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07662 ATGGAAATCTTTGGAAAAACATTCTTCATACTTTTATTACTTTCTTTATTTTTCTCAATAGTCTCATCAAGAAAAGTACCTTCCACAAAAAACATAGATTGGTGGTGTAACCAAACACCACATCCTCAACCATGCAAACACTATACAACTCAAATGAAGAATCATTTCAAAATCAAACATAGAGTTGAGTTTAGAAGAATGCTTGTTCAACTAGCCTTAGAACAATCTCTTATCATGCAAAAAGAATCGCAACAAAACTCATCACTCGAGCATAAAATCGTTCATGGTGATTGTTTGAAGCTGATAGAAAACACAATCTTTCATCTCAATCGTACACTAGAAGGATTAAACAATATATGTTCACCAAATGATGCACAAACATGGCTCACAACTTCTCTCACAAACATTGAAACATGTAAAAATGGAGCTTTAGAACTCAATGCGCAAGATTTCAATTTCATTGTTCATAACAATGTAATTGAGATGATAAGGAACACCTTAGCCATCAATATGTATTTCTTGAAACACAACAAAGAAACTGGAGAAGGGTCATTTCCAAGTTGGTTTTCAAAGCATGAGCGGAAGCTTTTGCAATATAAATCTTCACTAAAGTTTAATATTGTGGTGGCAAAAGATGGTTCGGGACAGTTTAAGACAGTGCAAGCTGCTTTGGATAATGCTGCTAATAGAAAATATAAAACAAGATTTGTGATACATGTGAAGAAAGGTGTTTATAAAGAAAATATTGAGGTTAATGTTCATAATGATAACATTATGTTGGTTGGTGATGGAATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGAGGTTATACTACTTATAGCTCAGCAACAGCTGGTATTGATGGACTTCACTTCATTGCGCGTGACATAACCTTCCAAAATACCGCCGGTCCACACAAAGGTCAAGCAGTGGCGCTACGATCAGCCTCTGATTTGTCTGTCTTCTATCGATGTGCCATATCAGGTTACCAAGACACTCTCATGACGCATGCACAACGTCAATTTTACAGACAATGCTACATCTACGGAACCGTAGACTTCATCTTTGGCAACGCCGCTGTGGTATTCCAAAATTGTAACATTTTCGCGAGAAAGCCATTAGATGGCCAAGCTAACATGATCACAGCCCAAGGTCGAGGAGATCCATTCCAAAACACCGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCGTCAGATCTAAAGCCCGTTGTCGACAAGTACAAAACCTATTTGGGTCGGCCTTGGCAACAATACTCAAGAGTTATGGTGATGAAAACTTTTATGGATACCTTAGTGAGTCCACTGGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGATACTTTGTATTATGGAGAGTATGAAAACTCTGGGCCGGGCTCATCGACAAAAGATAGAGTGAAATGGCTGGGCTATCATGTGATTACAAGCCCAAGTGATGCATCAAAGTTTACTGTAATTGGGCTTCTTGCAGGCCCATCATGGTTGGCTACTACTACTGTGCCATTTACATCTGGTCTTTGA 1560 0.3846 MEIFGKTFFILLLLSLFFSIVSSRKVPSTKNIDWWCNQTPHPQPCKHYTTQMKNHFKIKHRVEFRRMLVQLALEQSLIMQKESQQNSSLEHKIVHGDCLKLIENTIFHLNRTLEGLNNICSPNDAQTWLTTSLTNIETCKNGALELNAQDFNFIVHNNVIEMIRNTLAINMYFLKHNKETGEGSFPSWFSKHERKLLQYKSSLKFNIVVAKDGSGQFKTVQAALDNAANRKYKTRFVIHVKKGVYKENIEVNVHNDNIMLVGDGMQNTIITSSRSVQGGYTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMTHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTYLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENSGPGSSTKDRVKWLGYHVITSPSDASKFTVIGLLAGPSWLATTTVPFTSGL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07662 519 PANTHER PECTINESTERASE 14 509 - -
Vivi3g07662 519 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Vivi3g07662 519 Pfam Plant invertase/pectin methylesterase inhibitor 31 169 IPR006501 GO:0004857
Vivi3g07662 519 SUPERFAMILY Pectin lyase-like 204 518 IPR011050 -
Vivi3g07662 519 SMART PMEI_2 27 169 IPR006501 GO:0004857
Vivi3g07662 519 FunFam Pectinesterase 200 519 - -
Vivi3g07662 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 170 IPR035513 -
Vivi3g07662 519 CDD PMEI-like_3 34 175 - -
Vivi3g07662 519 Pfam Pectinesterase 206 503 IPR000070 GO:0030599|GO:0042545
Vivi3g07662 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 173 IPR035513 -
Vivi3g07662 519 Gene3D - 200 519 IPR012334 -
Vivi3g07662 519 NCBIfam pectinesterase inhibitor domain 9 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07662 Vivi-Chr3 213300047 213302031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07662 29 519 Carbohydrate Esterase AT5G51500 57.171 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07662 K01051 - gmx:100806133 790.801