Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07639 ATGGATATTGTTATTAGAAGAAATTTTAATTTGAATGAGAGTCCAACTGATGATATTTCTTTAGAAAATGGTTATTCAGAAATAGTTGTTGATCATTTTGATCATAATATCATGGAGAAAGACATGTTAGAAGTTGAAAAAATTGGAACTTTTGAGAGTCAAAATCCTATATTTTCAAGTCCGAATATTGTTATAAATAGTTTTTTAGAAGAAGTTGATGAAGATGAAGTTTGTGATGAGACAAATATGGTTCCTTTTATTGGTCAAATATTTCTTACTGAAGAAGAAGCATTTGCTTTTTACAAGAGATATGCATATCATCACGGGTTCTCAATTCGAAAAGGTCGGTTCATAAAACAAAAGGATGGAATTATTAGTCGGCGTGATTTTTTTTGTCATCGTGAAGGTAGAGTTTCCTCGAAAGACATAGAACCATCAAAAGAACAGAGAAAAAGAGAATCAGCAAAGTGTGAATGTAAAGCTCATTTACGAATTAAACTACAAAAGTCTCAAGATATATTTCCAAGTGAGTGGCGAGTTACAACATTTGTTGTTGAACACAATCATGGTTTACTAACTCAATCAGAGGTGCGTTTTTTACCTTCTTATCGAACTATCTCTGAAAATGATTACAATCGCATTTTCTTATTAAAAGAAGGTGGGCTTTCTGTTAGACAAATAATGCGTATCTTAGAGTTAGAGAAAAATGTGAAGCATGGATATCTTCCATTTATTGAAAAGGACGTTCGCAATCTTTTTTTGAAAGCCAATAAAAAAGTTGAAGGAAGTGATGCTGTGGATCTTCTAAATTATTGTGAGAATGCAAAAAAGAGTTGCTCAAAGTTTCAATATTCTTATACACTTGATGAAGAAAAAAGGCTAGAACATATTTTTTGGTCCTCTGCTTCTTGCTTTGATTGGTACAAAAAATATGGTGATGTTGTTGTATTTGATACTACATACAAGGTAAATTCTTATGAAATGCCGTTTGGAATTTTTGTGGGTATGAATAACCATGGAAAGACTATACTTTTTGGATGTGCACTTTTACGGAATGAAACAATGTCTGCATTTCGTTGGTTAATGAAGTCACCGAGGACTATATTAACCGACCAAGATCCATGGATGAAAGAAGCAATCTCGAAAGAAATGTCATCAACAAAGCATAGTTTCTGTATATGGCATATAACTTTCAAGTTTAGTTCTTGGTTTAATGCTATACTTCGAGACAAATATGCAAAATGGTGTTCTGATTTTTATGTATTGTATAAATTGGAGACATGTGAAGAATTTGAGTATCAATGGCCAAAAGTTGTTTCTAAGTATAACTTGCAGACAAATAAACATGTGAAAGGATTGTATGAGATTAGAAAGTATTGGGCACTCGCTTATCTTCGTGAATATTTCTTTGGTGGAATGACAACCACTGGAAGATCAGAGAGTATTAACGCATTCATTAAGAGATTCATCAATTCCCACACAAGTTTAACTGACTTTGCAAAGCAGGTTGATATAGCAATTGATGATATTAAGCAAAAAGAAGAGCTTGATATAATGTTAGAAAAGTGCAAAGGGTCAAATATGAAGTTGATGTCACCATTACAAGAGCAAGCTCAAAGTGTTCTCACACGTTTTTCTTTTCAGAAGTTTCAAGATGAGTTTGAAAGATCCATCCAATACTCAATTCTTCATGAGAATGGTAATGTGTTAGTGTTGCAATACTATAAAGATGATAATAGTAAGAAACATCAAGTATTTTGGGATGGTAAAATAGCTATATGTAGTTGCAAACTATTTGAATTTTGGGGGATATTGTGTCGCCACATTCTTAGTGTTTTTCTTCATAAAGATTGTCATAGAATCCCTAATGACTACTTGTTGTCACGATGGCGGCTTCAAGAATCACATGCAGATGATGAAGTAGTTGATTATCAAATAATGGATTGTAATAATGAAGCTGGTTCACAACAAGTTATTCATTGTCCCCCAATTTCCAAAACAAAAGGCCGTCCTAAACGAAGACGAATTAAAGGTGGAAAAGAGTTATCTCATAACATGAATGCTTGTGGATTATGCAAAGGCGAAGGACATAACATTGTTACATGTCCCCTAAAAGAAAAAAAGAAGACAAACAAAAAAAAGAAAAATTGTGAAGATGCCAATTTAAATCCAATTCTTCTTTCAAAAGTTTAG 2193 0.3274 MDIVIRRNFNLNESPTDDISLENGYSEIVVDHFDHNIMEKDMLEVEKIGTFESQNPIFSSPNIVINSFLEEVDEDEVCDETNMVPFIGQIFLTEEEAFAFYKRYAYHHGFSIRKGRFIKQKDGIISRRDFFCHREGRVSSKDIEPSKEQRKRESAKCECKAHLRIKLQKSQDIFPSEWRVTTFVVEHNHGLLTQSEVRFLPSYRTISENDYNRIFLLKEGGLSVRQIMRILELEKNVKHGYLPFIEKDVRNLFLKANKKVEGSDAVDLLNYCENAKKSCSKFQYSYTLDEEKRLEHIFWSSASCFDWYKKYGDVVVFDTTYKVNSYEMPFGIFVGMNNHGKTILFGCALLRNETMSAFRWLMKSPRTILTDQDPWMKEAISKEMSSTKHSFCIWHITFKFSSWFNAILRDKYAKWCSDFYVLYKLETCEEFEYQWPKVVSKYNLQTNKHVKGLYEIRKYWALAYLREYFFGGMTTTGRSESINAFIKRFINSHTSLTDFAKQVDIAIDDIKQKEELDIMLEKCKGSNMKLMSPLQEQAQSVLTRFSFQKFQDEFERSIQYSILHENGNVLVLQYYKDDNSKKHQVFWDGKIAICSCKLFEFWGILCRHILSVFLHKDCHRIPNDYLLSRWRLQESHADDEVVDYQIMDCNNEAGSQQVIHCPPISKTKGRPKRRRIKGGKELSHNMNACGLCKGEGHNIVTCPLKEKKKTNKKKKNCEDANLNPILLSKV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07639 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 635 IPR031052 GO:0006355
Vivi3g07639 730 Pfam FAR1 DNA-binding domain 100 192 IPR004330 -
Vivi3g07639 730 Pfam MULE transposase domain 314 397 IPR018289 -
Vivi3g07639 730 SMART 26again6 592 619 IPR006564 GO:0008270
Vivi3g07639 730 Pfam SWIM zinc finger 584 616 IPR007527 GO:0008270
Vivi3g07639 730 ProSiteProfiles Zinc finger SWIM-type profile. 583 617 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07639 Vivi-Chr3 213066465 213068834 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g07639 FAR1 2.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07639 - - vvo:131639681 1284.63