Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07618 ATGGCAGTCATAGGAAACTATTCTGTCATGAAACTTTGTTGTTCATCAAACCGTGCAATAACCTTAATACAAAAGGTTATAGCAGAAGTCATTGGAACATATTTTCTTGTATTTGCAGGTTGTGGTGTTGTAGCAGTTGACAAAATCTATGGCTCCGTAACATTTCCAGGGATATGCATCACTTGGGGTTTGGTTGTAACTGTCATGTGTTACTCAGTTGGTCATATTTCCGGAGGACTCTTCAACCCCGCGGTTACGATAACTTGGGCCATTTTTCGCCGAATCAAGTTCATCGAAGCTCCACTTTACATCGCTGCTGAGTTACTCGGTTCAACGCTTGCGAGTTTAACATTGTCTCTAATGTTTGATATTACACCGAAATCTTATTTCGGAACTGTGCCGGTTGGGTCAAGTGGTCAATCTTTAGCTGTTGAAATCATTATCAGTTTTCTGTTAATGTTTGTTATTTCAGCTGTTACGACGGATCATAGAGCGGTGGACGATTCAGCGAGTATCGCAGTTGGAATGACGATAACGTTGAATCTTTTCATAGCTGGACCTGTTTCCGGTGCATCGATGAATCCAGCAAGAAGTATCGGTCCTGCAATTGTGGTTCATATTTACAATGGTTTATGGATATATGTAGTTGGTCCTATTGTTGGAGCTGTAGCTGGAGCACTTGCTTATAACTTTCTTAGGTCTGTATACAAACCAAGGGCGGAAAAAGCAGTAGAAACACCAGCTTCAGAATTGACAACAGACAAGCAAAATTCAGAATTAACAGCAGAAGAACCATTGAGGAGTATAAGTATAGGTTGA 819 0.4078 MAVIGNYSVMKLCCSSNRAITLIQKVIAEVIGTYFLVFAGCGVVAVDKIYGSVTFPGICITWGLVVTVMCYSVGHISGGLFNPAVTITWAIFRRIKFIEAPLYIAAELLGSTLASLTLSLMFDITPKSYFGTVPVGSSGQSLAVEIIISFLLMFVISAVTTDHRAVDDSASIAVGMTITLNLFIAGPVSGASMNPARSIGPAIVVHIYNGLWIYVVGPIVGAVAGALAYNFLRSVYKPRAEKAVETPASELTTDKQNSELTAEEPLRSISIG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07618 272 MobiDBLite consensus disorder prediction 246 272 - -
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 CDD MIP 24 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 PANTHER AQUAPORIN NIP2-1 14 245 IPR034294 -
Vivi3g07618 272 Pfam Major intrinsic protein 19 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi3g07618 272 MobiDBLite consensus disorder prediction 249 264 - -
Vivi3g07618 272 Gene3D Glycerol uptake facilitator protein. 6 245 IPR023271 -
Vivi3g07618 272 SUPERFAMILY Aquaporin-like 20 239 IPR023271 -
Vivi3g07618 272 NCBIfam MIP family channel protein 28 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07618 Vivi-Chr3 212694826 212695793 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07618 14 241 Major Intrinsic Protein MIP AT5G37820 64.629 3.70e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07618 K09874 - gmx:100791338 338.961