Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07561 ATGGCCAATATTCTTCCTATCAAATTTCTTGTTATTTCCAATATAGTTTTATTATTGTTCTTCTCTCAATTATCCACCGCAATTGATACTATCACCCAATTTCAATCTCTTGATGATGGAAACACCTTGGTTTCTAGTGATGGAACTTTTGAGTTAGGATTTTTCAGACCAGGTAGTTCCACAAATCGCTATGTTGGAATATGGTACAAAAACATCTCAAATAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACGACAATTCCAACTCAACCATGTTGACCATTAACAAGGAAGGAAACCTTGTACTACTTACCAACAACAATAAAACTCTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCTTCTACAAGTTCACATGTGGCTCAACTATTAGATAATGGAAATTTTGTAATCAAAGACAACAATAAGAAATTTCTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCGGATATGAAGCTTGGTTGGAACTTAGAAACCGGTCACAATCGTCGATTAACTTCGTGGAAAAATTGGGATGATCCGTCTTCGGGAAACTTAACTTGGAGTATTGTCCTTAGTAGTAACCCGGAAGTTATATTAAAAAAAGGGTCAACTGAATTTCACAGGAGTGGTCCTTGGAATGGAATTGGGTTTAGTGGAGCGCCCGCATTAAGTGTAGCTCAAAATGTTGAACCAAAATTAGTGAACAATTCAAATGAAGTTTACTTCACATATAGTCTTGTGAGCAAGAGTAAGCTTTTAATAATTTATCTGAACCAAACAATTGGTTTTCGCGAACGCATTGTATGGACTACAGAAGAAAATGTTTGGAAGATTTTTGAGCAGGTGCCCAGGGGAGATGGTTGTGATATTTATAATTCTTGTGGATCTTATGGAAATTGTAATCCTATTAAGTCTCCAGTTTGTGAGTGTTTAGATGGGTTTAAGCCCAAATCGTCACAAAATTTGGACACATATAATTGGACACAAGGTTGTGCGCGCAAAATTCAACCCATATTTAAATGCATGGTGGGAGATGGTTTTACAAAATTTTCTGGATTGAAATTACCGGAGACAACACATACTTGGGTTGATGCTAAAATGAAACTAGAGGATTGCAAGAAAAAATGCTTAAAAGATTGTTCTTGTACAGCTTATTCAAACTTGGATGTTAGAGGAGATGGCAGTGGTTGTTGTTTATGGTTTGGTGATCTTATTGATTTGAGACACGTTTCATCAATTAATCCAGATCTGTATGTTCGAGTGAATGCTTCTTCAATAGTTTCTGGTGGACATAAGAAAAGTCATACTTTGACAATTGCAATCACTATTCCGTTGGTCATTGTTTTCCTGCTTGTGACCATAGTCTTCTACATTTACAAGAGAAAAAGAAAGCAAAGAGGAATAGAAGATAAATCAAAGAACATCATTTTAACGAAAAAGAAAAAGGAAGACGAACAAGATTTTGAGCTTCCTTTCTTCAATCTTTCTACAATGATTGATGCCACCAATAACTTTTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGGCCAGTATATAAGGGTATACTTGCTCTAGAAAGACGAGAGATTGCTGTCAAAAGGCTTTCGAGAAGTTCTAAACAAGGAACAAAAGAGTTTAAAAATGAAGTTATATTATGTTCAAAACTTCAACACCGAAATCTTGTCAAAGTTCTTGGTTGTTGTATTCAAGGAGAAGAGAGGATGCTTATATATGAATATATGCCTAATAGAAGTTTAGATTCGTTTATTTTTGATCCAACTCAAAAGAAACTTTTAGATTGGTCTAAGCGCTTTAACATCATATGTGGAATTGCTCGTGGACTTCTTTACCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAATATTTTGTTAGATAGTGATATGAATCCAAAGATTTCTGATTTTGGCTTGGCAAAAATTTGTGGTGATGATCAAGTTGAAGGAAATACAAACAGAGTAGTCGGGACACATGGTTACATGGCTCCTGAATATGCCATTGATGGACTATTCTCCATAAAATCTGATGTATTTAGCTTTGGCATTTTGTTGCTAGAGATTGTAAGTGGAAAGAAAAATAAAAGACTTACATATCCAAGCAGCAATCATAGTCTTGTAGGACATGCTTGGAGGTTGTGGAAAGAGGGAATCTCAGAAGAATTGATTGATGATTGTGTTGGGGACTCATTTATTCTATCTGAAGCCTTACGTTCCATACAAGTTGGTCTTTTGTGTCTACAATATCATCCAAATAATAGACCTAATATGGCATCGGTGCTTGCAATGTTAACAAATGAAATAGTTTTATCTCAACCAAAGGAACCTGGCTTCATTAAAGAAAGGGCCTCCACAGAGGGAAATTCTACAACCGAAAATTTAATTTCTTCTTCAATCAATGAAGTCACTATTTCATTATTGGATGTTAGATGA 2502 0.3529 MANILPIKFLVISNIVLLLFFSQLSTAIDTITQFQSLDDGNTLVSSDGTFELGFFRPGSSTNRYVGIWYKNISNRRIVWVANRDNPIKDDNSNSTMLTINKEGNLVLLTNNNKTLVWSTNITTQSLSSTSSHVAQLLDNGNFVIKDNNKKFLWQGFDFPCDTLLPDMKLGWNLETGHNRRLTSWKNWDDPSSGNLTWSIVLSSNPEVILKKGSTEFHRSGPWNGIGFSGAPALSVAQNVEPKLVNNSNEVYFTYSLVSKSKLLIIYLNQTIGFRERIVWTTEENVWKIFEQVPRGDGCDIYNSCGSYGNCNPIKSPVCECLDGFKPKSSQNLDTYNWTQGCARKIQPIFKCMVGDGFTKFSGLKLPETTHTWVDAKMKLEDCKKKCLKDCSCTAYSNLDVRGDGSGCCLWFGDLIDLRHVSSINPDLYVRVNASSIVSGGHKKSHTLTIAITIPLVIVFLLVTIVFYIYKRKRKQRGIEDKSKNIILTKKKKEDEQDFELPFFNLSTMIDATNNFSNDNKLGEGGFGPVYKGILALERREIAVKRLSRSSKQGTKEFKNEVILCSKLQHRNLVKVLGCCIQGEERMLIYEYMPNRSLDSFIFDPTQKKLLDWSKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDSDMNPKISDFGLAKICGDDQVEGNTNRVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNKRLTYPSSNHSLVGHAWRLWKEGISEELIDDCVGDSFILSEALRSIQVGLLCLQYHPNNRPNMASVLAMLTNEIVLSQPKEPGFIKERASTEGNSTTENLISSSINEVTISLLDVR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07561 833 CDD STKc_IRAK 521 789 - -
Vivi3g07561 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 591 - -
Vivi3g07561 833 SMART serkin_6 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07561 833 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Vivi3g07561 833 Pfam Protein kinase domain 516 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07561 833 Gene3D Hepatocyte Growth Factor 349 429 - -
Vivi3g07561 833 Pfam PAN-like domain 351 417 IPR003609 -
Vivi3g07561 833 SMART ntp_6 352 431 IPR003609 -
Vivi3g07561 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Vivi3g07561 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 778 - -
Vivi3g07561 833 Gene3D Phosphorylase Kinase; domain 1 488 591 - -
Vivi3g07561 833 CDD B_lectin 35 159 IPR001480 -
Vivi3g07561 833 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07561 833 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Vivi3g07561 833 CDD PAN_AP_plant 352 431 - -
Vivi3g07561 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 190 IPR036426 -
Vivi3g07561 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Vivi3g07561 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 156 - -
Vivi3g07561 833 Pfam S-locus glycoprotein domain 218 328 IPR000858 GO:0048544
Vivi3g07561 833 SUPERFAMILY Protein kinase-like (PK-like) 496 795 IPR011009 -
Vivi3g07561 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Vivi3g07561 833 SMART blect_4 34 159 IPR001480 -
Vivi3g07561 833 ProSiteProfiles PAN/Apple domain profile. 351 432 IPR003609 -
Vivi3g07561 833 Pfam D-mannose binding lectin 77 185 IPR001480 -
Vivi3g07561 833 ProSiteProfiles Bulb-type lectin domain profile. 28 157 IPR001480 -
Vivi3g07561 833 Gene3D - 22 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07561 Vivi-Chr3 209046256 209050342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07561 444 801 Receptor kinase-like Gene Family AT4G23230 51.532 2.16e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07561 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07561 - - tpra:123915417 1249.19