Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07558 ATGGCCAATATTTTTCCTATCAAAGTTCTTGTTATTATTTCCAATATAGTTTTATTATTGTCCTTCTCTCAATTATCCACTGCAATTGATACTATCACACAATTTCAATCTCTTGATGATGGAAACACCTTGGTTTCTAATAATGGAACTTTTGAGTTAGGTTTTTTCAGACCAAGTACTTCCACAAATCGCTATGTTGGAATATGGTACAAAAACATCCCAAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAGTTCCAACTCAACCATGTTGATCATAAACAAAGAAGGAAACCTTGTACTACTCACTAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCTTCTACAAGTTCACATGTGGCTCAACTATTAGACAATGGAAATTTTGTAATCAAAGACAAAAATAATAGCTTTTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCGGATATGAAGCTTGGTTGGGACTTAAAAACTGGTCACAATCGTCGGTTAACTTCGTGGAAAAATTGGGATGACCCGTCTTCAGGAAACTTAACTTGGGACATGGTCCTTAGTAGTAATCCAGAAACTTTTTTGAAAAAAGAATCATTTGATTTCTATAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGCGGAGCGCCGGAGGTAAGTGCTACTCCAATTGTTGAACAAAAATTTGTGAACAATTCAAATGAAGTTTACTACACATATAGCCTTGTGAACATGAGTACCGTTTCAATAATTTATTTGAACCAATCAAGTAGTACACGTAAACGCGTGACATGGATTTCAAACGACAATGAATGGAAGAATGTTGAGTCCGAGCCAAGAGACTCGTGTGATGCTTATAATCTTTGTGGGCCCTATGGAAATTGTATTTCTACTAATTCTCCATTGTGTGAGTGTTTAGATGGGTTCACGCCCAAATCTCAAGAGGATTGGGACACGTATAATTGGACACAGGGATGTGTGCGCAAAATTCAACTTTCAACTAAATGCACGGTGAATGATGGTTTTAAAAATTTTTCTGGATTGAAATTGCCAGAAACAACACATACTTGGGTTGATGCTAAAATGACAATTGAGGATTGCAAGAAAAAATGTTTGAAAAATTGTTCTTGTACGGCATATTCACACCTAGATGTTAGAGGAAATGGTAGTGGTTGTTGTTTATGGTTTGGTGATCTTATTGATTTGAAACAGGTGTCATCAGTTAATCCAAATCTGTATGTTCGAGTGAATGCTTCTGCAATAGATTCAAATGAAGAAGTTTCTGGTGGAAATAAGAAAAGTCATACTTTGACAATTGCAATCACTATTCCATTGGTCATTGTTTTCCTACTTGTGATCATAGTCTTCTACATTTACAAGAGAAAAAGAAAGCAAAGAGGTAAAGAAGATAAATCAAAGAACATCATTTTAACAAAAATGAAAGAGGAAGAACAAGATTTTGAGCTTCCTTTCTTCGATCTTTCCACAATGATTGATGCTACTAATAACTTCTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGGCCGGTATATAAGGGTATACTTGCTCAAGAAAGACGAGAGATTGCCGTCAAAAGGCTGTCGAGAAGTTCTAAACAAGGAACAAGAGAATTTAAAAATGAAGTTATATTATGTTCAAAACTTCAACATCGAAATCTTGTCAAAGTTCTTGGCTGTTGTATTCAAGGAGAAGAAAGGATGCTTATCTATGAATACATGCCCAACAAAAGTTTAGATTCATTTATTTTTGATCCAGTTCGAAAGAAACTTTTAGATTGGTCAAAGCGCTTTAACATCATATGTGGAATCGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAATATTCTGTTGGACAGTGATATGAATCCCAAAATTTCAGATTTCGGTTTGGCAAAAATTTGTGGAGATGATCAAGTTGAAGGGAATACAAACAAAGTAGTTGGGACACATGGTTATATGGCGCCTGAATATGCTATTGATGGACTATTCTCTATAAAGTCTGATGTATTTAGCTTTGGCATATTATTACTAGAGATTGTAAGTGGAAAGAAAAATAAAGGACTTACATATGAAAACAACAATCACAATCTTGTTGGACATGCTTGGAGGTTGTGGAAAGAGGGGAACTCAAAAGAATTGATTGATGACTGTTTTGAGGATTCGTTTATTCTATCTGAAGCTTTATGTTGCATACAAGTTGGTCTTTTATGTCTACAACGTCATCCAAATAATAGACCTAATATGACATCAGTGCTTGTAATGTTGACAAATGAAACTGTTTTAGCTCATCCAAAGGAACCTGGCTTCATAATAGAAAGAGACTCCACTGAGGGAAATTCTACAACCGAAAATTTAATTTCTTCTTCAATCAATGGAGTCACTATTTCTCTATTGGATGCTAGATGA 2511 0.3521 MANIFPIKVLVIISNIVLLLSFSQLSTAIDTITQFQSLDDGNTLVSNNGTFELGFFRPSTSTNRYVGIWYKNIPRRIVWVANRDNPIKDNSSNSTMLIINKEGNLVLLTNNNQTLVWSTNITTQSLSSTSSHVAQLLDNGNFVIKDKNNSFLWQGFDFPCDTLLPDMKLGWDLKTGHNRRLTSWKNWDDPSSGNLTWDMVLSSNPETFLKKESFDFYRSGPWNGVGFSGAPEVSATPIVEQKFVNNSNEVYYTYSLVNMSTVSIIYLNQSSSTRKRVTWISNDNEWKNVESEPRDSCDAYNLCGPYGNCISTNSPLCECLDGFTPKSQEDWDTYNWTQGCVRKIQLSTKCTVNDGFKNFSGLKLPETTHTWVDAKMTIEDCKKKCLKNCSCTAYSHLDVRGNGSGCCLWFGDLIDLKQVSSVNPNLYVRVNASAIDSNEEVSGGNKKSHTLTIAITIPLVIVFLLVIIVFYIYKRKRKQRGKEDKSKNIILTKMKEEEQDFELPFFDLSTMIDATNNFSNDNKLGEGGFGPVYKGILAQERREIAVKRLSRSSKQGTREFKNEVILCSKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFIFDPVRKKLLDWSKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDSDMNPKISDFGLAKICGDDQVEGNTNKVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNKGLTYENNNHNLVGHAWRLWKEGNSKELIDDCFEDSFILSEALCCIQVGLLCLQRHPNNRPNMTSVLVMLTNETVLAHPKEPGFIIERDSTEGNSTTENLISSSINGVTISLLDAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07558 836 Gene3D Phosphorylase Kinase; domain 1 491 594 - -
Vivi3g07558 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Vivi3g07558 836 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Vivi3g07558 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 594 - -
Vivi3g07558 836 Pfam Domain of unknown function (DUF3403) 791 836 IPR021820 GO:0004674
Vivi3g07558 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 780 - -
Vivi3g07558 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 190 IPR036426 -
Vivi3g07558 836 SMART ntp_6 351 430 IPR003609 -
Vivi3g07558 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Vivi3g07558 836 SMART blect_4 35 159 IPR001480 -
Vivi3g07558 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vivi3g07558 836 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Vivi3g07558 836 Gene3D Hepatocyte Growth Factor 348 429 - -
Vivi3g07558 836 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
Vivi3g07558 836 CDD PAN_AP_plant 351 430 - -
Vivi3g07558 836 CDD STKc_IRAK 524 792 - -
Vivi3g07558 836 CDD B_lectin 36 159 IPR001480 -
Vivi3g07558 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 156 - -
Vivi3g07558 836 ProSiteProfiles Protein kinase domain profile. 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07558 836 SMART serkin_6 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07558 836 SUPERFAMILY Protein kinase-like (PK-like) 500 798 IPR011009 -
Vivi3g07558 836 ProSiteProfiles PAN/Apple domain profile. 350 432 IPR003609 -
Vivi3g07558 836 CDD EGF_CA 295 327 - -
Vivi3g07558 836 Gene3D - 23 155 IPR036426 -
Vivi3g07558 836 Pfam PAN-like domain 350 416 IPR003609 -
Vivi3g07558 836 Pfam D-mannose binding lectin 77 185 IPR001480 -
Vivi3g07558 836 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Vivi3g07558 836 Pfam Protein kinase domain 519 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07558 Vivi-Chr3 209019195 209024935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07558 448 805 Receptor kinase-like Gene Family AT4G23190 51.099 2.02e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07558 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07558 - - tpra:123915417 1288.09