Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07546 ATGGCCAATTTTCTTCCTATCAAAGTTCTTGTTATTATTTCCAATATAGTTTCATTATTTTTCTTCTCTCAATTATCCACCGCAGTTGATTCAATCACTCAATTTCAATCTCTTGATGATGGCAATACCTTGGTTTCTAATGATGGAACTTTTGAGTTAGGATTTTTCCGACCAGGAAGTTCCACAAATCGCTATGTTGGAATATGGTACAAAAACATCTCAAATAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAATTCCAACTCAACCATGTTGATCATAAACCAAGAAGGAAACCTCGTACTACTTACCAATAACAATCAAACTCTTGTTTGGTCAGTAAACATCACAACACAATCTTTGTCTTCTACAAGTTCACATGTGGCTCAACTATTAGACAATGGAAATTTTGTAATCAAAGACAACAATAATAACTTTCTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCGGATATGAAGCTAGGTTGGGATCTAAAAATAGGTCTCAATCGTCAATTAACTTCATGGAAAAATTGGGATGATCCGTCTTCGGGAGATTTAACTTGGGGTATTGTTCTTAATAGTAATCCAGAAATTATATTAAAAAAAGGATCCATTGAGTTTCATAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGTGGAGCGCCTGCGGTGAGCGTTACTCCAATTGTTCATACAAAATTTGTGAACAATTCAAATGAAGTTTATTATACGTATAGTCTTGTAAGCAAGAGTGAGGTCTCCATAACTTATTTGAATCAAACACTTGATAATCGTCAACGCGTTACATGGGTTCCAAAAGACAATATTTGGAGGGTTTATGAGTCTGTGCCAAGAGACGATTGTGATGCCTACAATCCCTGTGGTTCTTATGGAGAATGTATTCCTAACGAGTCACCTATTTGCCAGTGTTTAGATGGGTTTGTGCCTAAATCGCCGCAAAATTGGAACACTTTTAATTGGACACAAGGATGTGTACGCAAAATTCACCCTGCATCTAAATGCATGGTGAATGATGGTTTTGGAAGATTTTCTAGATTAAAATTACCGGAAACTACACATACTTGGGTCGATGCTAATATGACAATTGTGGATTGTAAGAAAAAGTGTTTGGAAAATTGTTCTTGCACGGGTTATTCAAACTTGGATGTTAGAGGAGATGGTAGTGGTTGTTGTATATGGTTTGGTGATCTTATTGGTTTGAAACAGGTTTCATCCGTTCAACAAGATCTATATGTTCGAATGGATGCTTCCTTAGTAGATTCAAATGGAGAAGTTTCTGGTGGAGATAAGAAAAGTCATACTTTGACAATTGCAATCACTATTCCATTGGTCATTGTTTTCCTACTTGTGATCATAATCTTCTACCTTTGCAAGAGAAAAAGAAAGCAAAGAGATAGATCAAAGAATATCATTTTAACAAAAATGAAAGAGGAAGAAGAACAAGATTTTGAGCTTCCTTTCTTCGATCTTTCCACAATGATTGACGCAACCAATGACTTTTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGGCCGGTATATAAGGGTATACTTGCTCTAGAAAGACGAGAGATTGCCGTTAAAAGACTGTCGGAAAGTTCTAAACAAGGAACGAGAGAATTTAAAAATGAAGTTATATTATGTTCAAAACTGCAACACCGAAATCTTGTCAAAGTTCTTGGCTGTTGTATTCAAGGAGAAGAAAGGATGCTTATCTATGAATATATGCCCAACAAAAGTTTAGATTCATTTATTTTTGATCCAGCTCGAAAGAAACTTTTAGATTGGTCAAAGCGCTTTAACATCATATGTGGAATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAATATTTTGTTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGCTTGGCAAAAATTTGTGGTGATAATCAAGTTGAAGGGAACACAAACAGAGTAGTTGGGACACATGGTTATATGGCTCCTGAATATGCTATTGATGGACTATTCTCCATAAAATCTGATGTATTTAGCTTTGGCATATTATTGCTAGAGATTGTAAGTGGAAAGAAAAATAGAGGACTTACATATCAAAACTGCAATCACAATCTTGTTGGACATGCTTGGAAGTTGTGGAAAGAGGGGAACTCAAAAGAATTGATTGATGATTGTTTTGGGGACTCGTTTATTCTATCTGAAGCCTTACGTTGCATACAAGTTGGTCTTTTATGTCTACAACGCCATCCAAATAATAGACCTAATATGACAACAGTGCTTGCGATGTTGACAAATGAAACTGTTTTAGCTCATCCAAAGGAACCTGGTTTCATAATAGAAAGGGTCTCCACCGAGGGAAATTGTACAACCCAAAATTTAATTTCTTCCTCAATCAATGAAGTCACTATTTCATTATTGGATGTTAGATGA 2508 0.3573 MANFLPIKVLVIISNIVSLFFFSQLSTAVDSITQFQSLDDGNTLVSNDGTFELGFFRPGSSTNRYVGIWYKNISNRRIVWVANRDNPIKDNNSNSTMLIINQEGNLVLLTNNNQTLVWSVNITTQSLSSTSSHVAQLLDNGNFVIKDNNNNFLWQGFDFPCDTLLPDMKLGWDLKIGLNRQLTSWKNWDDPSSGDLTWGIVLNSNPEIILKKGSIEFHRSGPWNGVGFSGAPAVSVTPIVHTKFVNNSNEVYYTYSLVSKSEVSITYLNQTLDNRQRVTWVPKDNIWRVYESVPRDDCDAYNPCGSYGECIPNESPICQCLDGFVPKSPQNWNTFNWTQGCVRKIHPASKCMVNDGFGRFSRLKLPETTHTWVDANMTIVDCKKKCLENCSCTGYSNLDVRGDGSGCCIWFGDLIGLKQVSSVQQDLYVRMDASLVDSNGEVSGGDKKSHTLTIAITIPLVIVFLLVIIIFYLCKRKRKQRDRSKNIILTKMKEEEEQDFELPFFDLSTMIDATNDFSNDNKLGEGGFGPVYKGILALERREIAVKRLSESSKQGTREFKNEVILCSKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFIFDPARKKLLDWSKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDSDMNPKISDFGLAKICGDNQVEGNTNRVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRGLTYQNCNHNLVGHAWKLWKEGNSKELIDDCFGDSFILSEALRCIQVGLLCLQRHPNNRPNMTTVLAMLTNETVLAHPKEPGFIIERVSTEGNCTTQNLISSSINEVTISLLDVR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07546 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 779 - -
Vivi3g07546 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Vivi3g07546 835 SMART blect_4 35 160 IPR001480 -
Vivi3g07546 835 CDD EGF_CA 296 328 - -
Vivi3g07546 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 482 593 - -
Vivi3g07546 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Vivi3g07546 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 157 - -
Vivi3g07546 835 Pfam PAN-like domain 351 415 IPR003609 -
Vivi3g07546 835 CDD STKc_IRAK 523 791 - -
Vivi3g07546 835 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Vivi3g07546 835 SMART ntp_6 352 431 IPR003609 -
Vivi3g07546 835 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Vivi3g07546 835 Gene3D - 23 156 IPR036426 -
Vivi3g07546 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Vivi3g07546 835 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Vivi3g07546 835 Pfam D-mannose binding lectin 78 186 IPR001480 -
Vivi3g07546 835 CDD B_lectin 36 160 IPR001480 -
Vivi3g07546 835 Gene3D Phosphorylase Kinase; domain 1 475 593 - -
Vivi3g07546 835 Pfam Protein kinase domain 518 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07546 835 SMART serkin_6 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07546 835 SUPERFAMILY Protein kinase-like (PK-like) 499 801 IPR011009 -
Vivi3g07546 835 ProSiteProfiles Bulb-type lectin domain profile. 29 158 IPR001480 -
Vivi3g07546 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 191 IPR036426 -
Vivi3g07546 835 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07546 835 CDD PAN_AP_plant 352 430 - -
Vivi3g07546 835 Gene3D Transferase(Phosphotransferase) domain 1 594 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07546 Vivi-Chr3 208784348 208791781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07546 449 804 Receptor kinase-like Gene Family AT4G23190 52.473 2.85e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07546 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07546 - - tpra:123915417 1359.36