Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07545 ATGGCCAATTTTCTTCCTATCAAAGTTCTTGTTATTATTTCCAATATAGTTTCATTATTTTTCTTCTCTCAATTATCCACCGCAGTTGATTCAATCACTCAATTTCAATCTCTTGATGATGGCAATACCTTGGTTTCTAATGATGGAACTTTTGAGTTAGGATTTTTCCGACCAGGAAGTTCCACAAATCGCTATGTTGGAATATGGTACAAAAACATCTCAAATAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAATTCCAACTCAACCATGTTGATCATAAACCAAGAAGGAAACCTCGTACTACTTACCAATAACAATCAAACTCTTGTTTGGTCAGTAAACATCACAACACAATCTTTGTCTTCTACAAGTTCACATGTGGCTCAACTATTAGACAATGGAAATTTTGTAATCAAAGACAACAATAATAACTTTCTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGTTGCCGGATATGAAGCTAGGTTGGGATCTAAAAATAGGTCTCAATCGTCAATTAACTTCATGGAAAAATTGGGATGATCCGTCTTCGGGAGATTTAACTTGGGGTATTGTTCTTAATAGTAATCCAGAAATTATATTAAAAAAAGGATCCATTGAGTTTCATAGGAGTGGTCCTTGGAATGGAGTTGGATTTAGTGGAGCGCCTGCGGTGAGCGTTACTCCAATTGTTCATACAAAATTTGTGAACAATTCAAATGAAGTTTATTATACGTATAGTCTTGTAAGCAAGAGTGAGGTCTCCATAACTTATTTGAATCAAACACTTGATAATCGTCAACGCGTTACATGGGTTCCAAAAGACAATATTTGGAGGGTTTATGAGTCTGTGCCAAGAGACGATTGTGATGCCTACAATCCCTGTGGTTCTTATGGAGAATGTATTCCTAACGAGTCACCTATTTGCCAGTGTTTAGATGGGTTTGTGCCTAAATCGCCGCAAAATTGGAACACTTTTAATTGGACACAAGGATGTGTACGCAAAATTCACCCTGCATCTAAATGCATGGTGAATGATGGTTTTGGAAGATTTTCTAGATTAAAATTACCGGAAACTACACATACTTGGGTCGATGCTAATATGACAATTGTGGATTGTAAGAAAAAGTGTTTGGAAAATTGTTCTTGCACGGGTTATTCAAACTTGGATGTTAGAGGAGATGGTAGTGGTTGTTGTATATGGTTTGGTGATCTTATTGGTTTGAAACAGGTTTCATCCGTTCAACAAGATCTATATGTTCGAATGGATGCTTCCTTAGTAGATTCAAATGGAGAAGTTTCTGGTGGAGATAAGAAAAGTCATACTTTGACAATTGCAATCACTATTCCATTGGTCATTGTTTTCCTACTTGTGATCATAATCTTCTACCTTTGCAAGAGAAAAAGAAAGCAAAGAGAAGATAGATCAAAGAATATCATTTTAACAAAAATGAAAGAGGAAGAAGAACAAGATTTTGAGCTTCCTTTCTTCGATCTTTCCACAATGATTGACGCAACCAATGACTTTTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGGCCGGTATATAAGGGTATACTTGCTCTAGAAAGACGAGAGATTGCCGTTAAAAGACTGTCGGAAAGTTCTAAACAAGGAACGAGAGAATTTAAAAATGAAGTTATATTATGTTCAAAACTGCAACACCGAAATCTTGTCAAAGTTCTTGGCTGTTGTATTCAAGGAGAAGAAAGGATGCTTATCTATGAATATATGCCCAACAAAAGTTTAGATTCATTTATTTTTGATCCAGCTCGAAAGAAACTTTTAGATTGGTCAAAGCGCTTTAACATCATATGTGGAATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAATATTTTGTTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGCTTGGCAAAAATTTGTGGTGATAATCAAGTTGAAGGGAACACAAACAGAGTAGTTGGGACACATGGTTATATGGCTCCTGAATATGCTATTGATGGACTATTCTCCATAAAATCTGATGTATTTAGCTTTGGCATATTATTGCTAGAGATTGTAAGTGGAAAGAAAAATAGAGGACTTACATATCAAAACTGCAATCACAATCTTGTTGGACATGCTTGGAAGTTGTGGAAAGAGGGGAACTCAAAAGAATTGATTGATGATTGTTTTGGGGACTCGTTTATTCTATCTGAAGCCTTACGTTGCATACAAGTTGGTCTTTTATGTCTACAACGCCATCCAAATAATAGACCTAATATGACAACAGTGCTTGCGATGTTGACAAATGAAACTGTTTTAGCTCATCCAAAGGAACCTGGTTTCATAATAGAAAGGGTCTCCACCGAGGGAAATTGTACAACCCAAAATTTAATTTCTTCCTCAATCAATGAAGTCACTATTTCATTATTGGATGTTAGATGA 2511 0.3572 MANFLPIKVLVIISNIVSLFFFSQLSTAVDSITQFQSLDDGNTLVSNDGTFELGFFRPGSSTNRYVGIWYKNISNRRIVWVANRDNPIKDNNSNSTMLIINQEGNLVLLTNNNQTLVWSVNITTQSLSSTSSHVAQLLDNGNFVIKDNNNNFLWQGFDFPCDTLLPDMKLGWDLKIGLNRQLTSWKNWDDPSSGDLTWGIVLNSNPEIILKKGSIEFHRSGPWNGVGFSGAPAVSVTPIVHTKFVNNSNEVYYTYSLVSKSEVSITYLNQTLDNRQRVTWVPKDNIWRVYESVPRDDCDAYNPCGSYGECIPNESPICQCLDGFVPKSPQNWNTFNWTQGCVRKIHPASKCMVNDGFGRFSRLKLPETTHTWVDANMTIVDCKKKCLENCSCTGYSNLDVRGDGSGCCIWFGDLIGLKQVSSVQQDLYVRMDASLVDSNGEVSGGDKKSHTLTIAITIPLVIVFLLVIIIFYLCKRKRKQREDRSKNIILTKMKEEEEQDFELPFFDLSTMIDATNDFSNDNKLGEGGFGPVYKGILALERREIAVKRLSESSKQGTREFKNEVILCSKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFIFDPARKKLLDWSKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDSDMNPKISDFGLAKICGDNQVEGNTNRVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRGLTYQNCNHNLVGHAWKLWKEGNSKELIDDCFGDSFILSEALRCIQVGLLCLQRHPNNRPNMTTVLAMLTNETVLAHPKEPGFIIERVSTEGNCTTQNLISSSINEVTISLLDVR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07545 836 SMART blect_4 35 160 IPR001480 -
Vivi3g07545 836 CDD EGF_CA 296 328 - -
Vivi3g07545 836 Pfam D-mannose binding lectin 78 186 IPR001480 -
Vivi3g07545 836 Pfam Protein kinase domain 519 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07545 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 157 - -
Vivi3g07545 836 Pfam PAN-like domain 351 415 IPR003609 -
Vivi3g07545 836 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Vivi3g07545 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Vivi3g07545 836 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Vivi3g07545 836 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 780 - -
Vivi3g07545 836 SMART ntp_6 352 431 IPR003609 -
Vivi3g07545 836 ProSiteProfiles Protein kinase domain profile. 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07545 836 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Vivi3g07545 836 Gene3D Phosphorylase Kinase; domain 1 475 594 - -
Vivi3g07545 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vivi3g07545 836 SMART serkin_6 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g07545 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Vivi3g07545 836 Gene3D - 23 156 IPR036426 -
Vivi3g07545 836 CDD STKc_IRAK 524 792 - -
Vivi3g07545 836 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Vivi3g07545 836 CDD B_lectin 36 160 IPR001480 -
Vivi3g07545 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 483 594 - -
Vivi3g07545 836 ProSiteProfiles Bulb-type lectin domain profile. 29 158 IPR001480 -
Vivi3g07545 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 191 IPR036426 -
Vivi3g07545 836 SUPERFAMILY Protein kinase-like (PK-like) 500 802 IPR011009 -
Vivi3g07545 836 CDD PAN_AP_plant 352 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07545 Vivi-Chr3 208784348 208791781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07545 449 805 Receptor kinase-like Gene Family AT4G23190 52.055 1.60e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g07545 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07545 - - tpra:123915417 1354.73