Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07536 ATGGATTCTAATAGGCCGCTTTTGTTACAATCACCAAGAACACCAAATGATCAAGAATTTCCAACACTTCCGGTATTTCCTGAATTACCGAAATCAAAGTCGAGTTCGAGCAACACAGTAACTTTCTCCGGCGTGGAATATGGTATTCAAGTTTATAATAAGAACTCTTCAAACTCATCAACATCATCAAGTAAAAGCGCTATCTCAGGATCAAGAAAATCTGTTAGGTATGGTTCAAAAGGTGGTGGTGGTGGTGGTGATTCTGATGGACTAAGCATGTCACAGAGAGAGTTAAGAGATGAAGATGCAAGATTGGTATACATCAATGATCCTGATAAAACAAATGAGAATTTCGAGTTTTTCGGAAATTCGATAAGAACTGCTAAGTACTCAGTTCTAACTTTCATTCCAAGGAATCTGTTTGAGCAGTTTCATAGAGTTGCTTATGTATATTTTCTCATCATTGCTATACTTAATCAGCTTCCTCAACTCGCGGTTTTCGGGAGATACGTTTCGATTCTACCGTTGGCTTTCGTTCTGTTTGTGACCGGTGTGAAAGATGCTTTTGAGGATTGGAGGAGACATAATTCAGATAAAGTTGAGAACAACAGGTTAGCATCAGTTTTGGTTCATGATGGTAGCTTCATTGACAAGAAATGGAAGGATATTAGGGTTGGTGAGATTTTGAAGATCAAAACAAATGAAACAATTCCCTGTGACATTGTTTTGTTGTCAACTAGTGATTCAACCGGTGTTGCGTATGTTCAAACTATTAACCTCGACGGGGAGTCGAATTTGAAGACTCGGTACGCGAAAATGGAGACAGGTTTAAAGATTCAACCGAGGTTTAACGGGTTGATCAAGTGTGAGAAACCGAATAGGAATATTTACGGATTTATGGCGAATATGGAGATTGATGGGAAGAAGTTATCGCTCGGATCAACCAACATTGTGCTTAGAGGATGTGAGCTCAAGAATACTAGTTGGGCGCTTGGTGTCGCGGTCTACTGCGGCCGCGACACCAAAGCTATGCTCAACAGTTCTGGAGCTCCGTCGAAGAGGAGTCGGCTAGAGACACGGATGAACTACGAAATCATTATGCTGTCGTTTTTTCTTGTTGCATTGTGTACGATTACGTCGGTTTGTGCTGCGGTTTGGTTGAAGCGCCATAAAGACGAGCTGGATCTGTTGCCTTATTATAGGAAACTTGATTTTTCGGAGGCGAAAGTTAAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTATCAGGTCATGATTCCTATTGCTTTGTATATTTCTATGGAGCTTGTTCGCGTTGGTCAGGCCTATTTCATGATCGAAGACGATCGATTGTTTGATAAAGCTACGAATTCGAGGTTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGACAGATTAAGTATGTGTTCTCTGATAAAACCGGTACACTTACCGAGAATAAGATGGAGTTTCAATGTGCTAGCATTTGGGGAGTTGATTATAGTTCCACAAAAGCCAGCATGGAGGATGAACAAACCGAATACTCGGTGCAAGTTGATGGAAAGATGTTGAAACCGAAGATGAAGGTGAAAGTTAATCTCGAGCTTTTGAAATTGGCGAGAAATGGATATCAAAATGCGGAAGGAAAAAGGATTTACGAGTTCTTTCTAGCGCTTGCAACGTGTAATACTATTGTGCCTCTTGTTGTTGACACACCTGATCCTGATGTCAAACTGTTAGATTACCAAGGTGAATCGCCCGATGAACAAGCATTGGCGTACGCTGCGGCTGCCTATGGTTTTATGCTCATCGAACGAACCTCTGGACACATCGTCATTGATATTCATGGAGAAAGACTAAAGTTCAATGTCTTGGGTTTACATGAATTCGACAGTGATCGAAAAAGAATGTCGGTTATATTAGGCTACCCTGACAATTCAGTAAAACTCTTTGTCAAAGGAGCCGACACGACCATGTTTAGTATAATCGACAAATCATACAACATGGACTTGATAAAATCGACAGAAACTCATCTTCACTCGTATTCATCTCTCGGTTTACGAACACTTGTGATTGGAATGAGAGAACTCAACACTTCAGAGTTCGAACAATGGCACGCATCCTACGAAGCAGCGAGCACCGCAGTGTTCGGTAGGGCTGCAATGCTTAGAAAAATTTCAAACCATGTTGAAAACAATGTCTGCATATTAGGAGCTTCTGCTATCGAAGATAAACTTCAACACGGCGTACCAGAGGCAATCGAGTCTCTAAGGGCAGCAGGGATTAAGGTTTGGGTGTTAACCGGTGACAAGCAAGAAACTGCTGTATCGATCGGATTCTCGTCGAAACTCTTAACAAGAAGCATGACTCAGATTATTATTAGTAGTAACAATAAAGCTTCGTGTAGAAAAAGTCTCAAAGATGCTCTTGAAAGATCTAGAAAACTTGATGCGGTTTCAACGCAGATCGCTTTGATTATCGATGGTGGAAGTCTCGTTCACATTCTCGATACTGATCATGAAGAAGAGCTATTTCAACTTGCGAGTTTGTGTTCCGTTGTTCTTTGTTGTCGAGTTGCTCCTTTGCAAAAAGCCGGTATTGTTTCGCTTGTGAAGAAGAGAACATCTGACATGACACTAGCCATTGGAGACGGTGCTAATGATGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGTATCAGTGGTCAAGAGGGTAGGCAAGCTGTAATGTCATCGGATTTCGCAATGGGACAGTTTAGGTTCTTAGTTCCTCTCTTGTTGGTTCATGGTCACTGGAATTACCAAAGGCTTGGTTACATGATTCTTTACAATTTCTACAGAAATGCTGTCCTGGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCGTTCACTTTAACAACCGCTATAAACGAATGGAGTTCCACATTGTATTCGATAGTCTACAGCGCACTACCGACTATCATTGTCGGAATTCTCGACAAAGATCTCGGAAGAAGCACTCTCCTAAGGTATCCTCAGCTTTATAGTGCTGGTCAAAGAAATGAAGCTTACAACAAGAAACTGTTTATGTTAACAATGGCTGATACTTTGTGGCAAAGCATGGTTATATTTTGGCCTCCACTCTTTGCATATTGGAAAAGTACTATTGATGTAGCAAGTATAGGAGATCTCTGGACTTTGGCAGTGGTTATTATTGTCAATTTACATTTGGCTATGGATGTTGTAAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTGTTGCTACTTTCATTGCTGTCATGATCATTGATTCTATACCTAAACTTCCTGGTTTCTGGGCCTTCTTTCATGTTGCGAATACAGGATTATTCTGGGCATTGTTGCTAGGAATTATCATAGCAGCATTACTTCCACGTTTGGTTGTAAAGTTTATCTATCAATACTATTTTCCAAGTGATATTCAAATTTCTAGAGAAGCTGAAAAAATGAGACAAGATCAAAGAGTTGCTGAAAATCGACAAATAGAAATGCTTCCTGTCTCATATCATCAACAAACATGA 3591 0.4043 MDSNRPLLLQSPRTPNDQEFPTLPVFPELPKSKSSSSNTVTFSGVEYGIQVYNKNSSNSSTSSSKSAISGSRKSVRYGSKGGGGGGDSDGLSMSQRELRDEDARLVYINDPDKTNENFEFFGNSIRTAKYSVLTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLASVLVHDGSFIDKKWKDIRVGEILKIKTNETIPCDIVLLSTSDSTGVAYVQTINLDGESNLKTRYAKMETGLKIQPRFNGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRDTKAMLNSSGAPSKRSRLETRMNYEIIMLSFFLVALCTITSVCAAVWLKRHKDELDLLPYYRKLDFSEAKVKDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLFDKATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKASMEDEQTEYSVQVDGKMLKPKMKVKVNLELLKLARNGYQNAEGKRIYEFFLALATCNTIVPLVVDTPDPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERLKFNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTTMFSIIDKSYNMDLIKSTETHLHSYSSLGLRTLVIGMRELNTSEFEQWHASYEAASTAVFGRAAMLRKISNHVENNVCILGASAIEDKLQHGVPEAIESLRAAGIKVWVLTGDKQETAVSIGFSSKLLTRSMTQIIISSNNKASCRKSLKDALERSRKLDAVSTQIALIIDGGSLVHILDTDHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIVYSALPTIIVGILDKDLGRSTLLRYPQLYSAGQRNEAYNKKLFMLTMADTLWQSMVIFWPPLFAYWKSTIDVASIGDLWTLAVVIIVNLHLAMDVVRWYWVTHAVIWGSIVATFIAVMIIDSIPKLPGFWAFFHVANTGLFWALLLGIIIAALLPRLVVKFIYQYYFPSDIQISREAEKMRQDQRVAENRQIEMLPVSYHQQT 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07536 1196 FunFam Phospholipid-transporting ATPase 593 726 - -
Vivi3g07536 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 922 1162 IPR032630 -
Vivi3g07536 1196 MobiDBLite consensus disorder prediction 1 39 - -
Vivi3g07536 1196 MobiDBLite consensus disorder prediction 53 93 - -
Vivi3g07536 1196 FunFam Phospholipid-transporting ATPase 178 346 - -
Vivi3g07536 1196 NCBIfam phospholipid-translocating P-type ATPase 120 1169 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi3g07536 1196 SFLD p-type atpase 473 945 IPR044492 -
Vivi3g07536 1196 Pfam E1-E2 ATPase 207 447 - -
Vivi3g07536 1196 SUPERFAMILY Calcium ATPase, transduction domain A 209 343 IPR008250 -
Vivi3g07536 1196 NCBIfam HAD-IC family P-type ATPase 864 980 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g07536 1196 MobiDBLite consensus disorder prediction 53 73 - -
Vivi3g07536 1196 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g07536 1196 Pfam Cation transport ATPase (P-type) 594 672 - -
Vivi3g07536 1196 SUPERFAMILY HAD-like 484 940 IPR036412 -
Vivi3g07536 1196 Gene3D - 185 346 - -
Vivi3g07536 1196 PRINTS P-type cation-transporting ATPase superfamily signature 894 913 - -
Vivi3g07536 1196 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Vivi3g07536 1196 PRINTS P-type cation-transporting ATPase superfamily signature 772 782 - -
Vivi3g07536 1196 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 98 1175 - -
Vivi3g07536 1196 SFLD Haloacid Dehalogenase 473 945 - -
Vivi3g07536 1196 CDD P-type_ATPase_APLT_Dnf-like 122 1052 - -
Vivi3g07536 1196 FunFam Phospholipid-transporting ATPase 748 934 - -
Vivi3g07536 1196 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 762 IPR023299 GO:0000166
Vivi3g07536 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Vivi3g07536 1196 Pfam Phospholipid-translocating ATPase N-terminal 106 173 IPR032631 -
Vivi3g07536 1196 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1161 IPR023298 -
Vivi3g07536 1196 PRINTS Sodium/potassium-transporting ATPase signature 971 991 - -
Vivi3g07536 1196 PRINTS Sodium/potassium-transporting ATPase signature 482 503 - -
Vivi3g07536 1196 Gene3D - 595 725 IPR023299 GO:0000166
Vivi3g07536 1196 Gene3D - 745 934 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07536 Vivi-Chr3 208670069 208675831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07536 62 1180 Primary Pumps ATPases AT5G04930 69.584 0.0 1657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07536 K14802 - gmx:100813982 1828.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07536 3 208670069 208675831 Vivi3g07536 3 208670069 208675831 ECH