Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07485 ATGGAAAGTTGCTTAGCTGATTTGGGAAAGGGTTGTGTGGAGAAATTGATAAATGGGGCATTAGCAGAATTACGTCATGTATTTTGCTTCACATGCACTGCTAATGAATTCAAAGAAAAAAAGATTTGGTTGGAAGCAAAAATAAAAACAATGGAGCAACATGCTAAAGTGGCAGCAGGAAATGATAAAGATATTGAAGCTGATTATCATTTATGGAAAGAGAAAGCTGAAAAGCTCGTTCAAGAGGACACCCAAACAAAACAAAAATGCTTTTTTGGATTATGTCATGATTGCATATGGCGATATAAAAAGGGAAAGGAGCTGGCAAATAACATAGAAGAGATTAAACAACTAACAGAAAAGGGAGGGACATTTGAAAATATTGAAATCTCTCGCCGTCTTCCGGATGTTGAACGTTACTCATCTAAAGAATACATATCTTTTCCAAGTAGAGATTCAAAATACAAAGAGATTTTGGATGCAATAAAAGATGACAACAACTATATGATCGTATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAGCTTAAGTCTGAAGAATTCGCTCATGTAATCGATACAACAGTCTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGAAATGGGAGGATTGTACTTACTCAGACCGAGCCAAAAAACTATGGAGCAGATTAACAACTGATGAAAAAGTTCTTATAATAATGGATGATGTGTGGGAAGGAGGCCCACCTCTTGATTTCGAACTAATAGGAATTCCAAAACAGGACAATCACAAAGGTTGCAAAGTTCTTATAACCACACGTAGTAAACGAATATCCAATATTATGGGATGTGATAAGATGATTGAATTAGATCTCTTACCTGAAGAAGAAGCATGGACCATGTTCAAAATGTATGCCGGTATAAACAATAATTCTTCCAAAAGTTTGATCGCCACGGGACGTGAAATTGCTAAGGAGTGCAAACAATTGCCGGTTGCAATTGCAGTTATCGCCAAAAGTTTAAAAGGCCAACAAGATCGTAAGCACAAATGGGATACTACCTTAAAATTATTGAAGGAAACTGTTTCCATGGACGATGTTGATGAAGAAAAGGTTGGAATTTACAAATGTTTGAAGCTTAGCTATGATCTTATTATGTATGAAAAATCCAAGATATTATTTCTCTTAGCTTCTTTATTCCCAGAAGATAAAGAAATTCCTATTGAAATTCTAACTAGAATTGGCATTGGAACGGGCATTTTTGGAAAAAATTACGGAAGCTACAATGATGCTAGAAACCAAGTAGGTGTAGCTAAAGATAAACTCATAGATTCATGTTTGTTGGTGGGGGTCGATGAAAAACATGTAAAAATGCATGATTTGGTTCGTGAAGCGGCTCAATGGATAGCATACAAAGAGATTCGACATGTCAATTTGTCGAACAAAGATGAAAAATCATCGGTTGAAATGGAAAAAAATATGAAATATTTATTTTGTGAAGGGAAGGACATGGATTTGTCTTCTTGGAAGTATGATTGTTCCAAAATTGAGACTCTAATTCTCGATGTGGAAAGGGATGAAGATCGTAGATGTATGGAAGTCCCAAAATATTTCCTTGAAAATATTGACCAGCTTCAAGTTTTGTACTTTTCAGGTCATGACAAACGACCCCTATCATTGCCATATTCAATTCACTCATTGTCAAAGATTCGATCGATACTGGTTGATGGAGTTGATTTAGGCGACATCTCTGTTTTTGGAAATCTGCAAAGTCTTGAAACTCTTGATTTGGTTGATTGCAAAATCAATGAATTACCAGACGAAATTGCAAAGTTGGGGAAATTTAAATTGTTAAACTTGGAATATTGTCAAATTCAAAGGAATGATCCATTTGAGGTTATTAAAAGATGCAAAACACTTGAAGAGTTGTACTTCATTGATAGTTTTAATGAATTTTGTCAAGAAATTACCTTACCCGAATTGCAAAGGTATCATATCCGTAAAGGGTGGACAATGCTTCCTGATTCACTATCAAAATATGTGTCTTTTAAAAAATTTGATGGCAATAAATATGTTTTTTCAAAACAAACATTCAAGTATCTCATGCAAACAACAGAGGGTCTTCAACTAGAGGAAATTAAGATGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATCAAGATATGAAAGATCTTATAGAGCTACGTCTGAGACGTATTTCAAAATTACAGTGCCTCATCGACACTAATGGTTCTCAATTTCTTAATGTATTGTCCAACTTGGTTATGTTAGAACTGGATGAAATGGAAAATTTGGAAGTACTATTCCATGGTTCTCTTTCTTTTGACTACTCTTTAAAGAATTTGGAGAAGGTATCAATAAAAGAGTGTAAAAAGCTTCAAATATTGTTCAATTGCAAGCTAAATCTCTGCAATCTAAAGACTTTGTCACTGTCAGATTGCCCATTAATGGTTAACCTCTTTCCACTGTTAACTTCTCAGAGCCTGGTGCTGCTAGAGGAATTCAAGATAGCAGATTGTAAGGGATTGAAAAACATAGTAATAGATGATGGTGATAATAATGACATGAGTCATGGAGCAATGTATCCAAAACTAAGCTTTCTTTCTATTGTAAGTTGTGATCAATTAGAATCAATATTTCCTTTCCTCTCTTTTGAAGACTTTCCAGTACTAGAAGTTATCAACATAAAAAAATGTGATAAGCTACAATATATATTTGGCCAATATCAACATGTTGAACTCAATTCATTGAAAGAAATAAAGCTTGGTGAATTACCAAATTTCATGGGTATTTGTCCAGAATATTCTCATTCCATGTCATCGCTCAAGAATGAGTCATCTTCCACTTCTAGAGATGGTTCCAAGGCACAAACACAAGTGGACCCTATCAAATGCAACATCTTATCTTTGAGTTGTTTATGTTGTCATGGTAATAATTATAGAAAAAAATCTGGGAGTAAGTCAACTACTAAAGTTCCATCAGTTAATGAGGATCCAATGCAGAATAATTCATCAGAATCAATATCAAGTTCACACCATCTTCAAATATGGGAACGTGCACAATGTTTTCCAGTACTACCACATATCATGTGCAATGTAAAAGAGCTTAAGTTGTCTGGTCTTTTGAAGATAAAATCTGTGTTTATCCTTTCTATTACTCCAAGAATGTTGGTGGAAACTTTGACAATTGAGAATTGTGATGAATTAAGACACATAATACTAGACATCGGAGATGATGACAATGTTGGCAAAAATTTAAGAAATGTCTTTCCAAAATTGAAAAAGCTTTACGTCAACGATTGCATGCAATTGGAATACATATTTGGACACTACACTGATGACCATCTACCGGAATTGGAAGGTGTCACACTTAGCCATCTGCCAAAGTTTGTTGCCATGTGTCCTCAACAATATTGCCTAACATTTCCACCTTTGAAACAACTTGAACTCTCAGAATGCCCCCTGGTTGCTATCAAATCTATTGGTGAATTCATTATTAATCTTTCAGATTCCAAATCTCTTGACAATACAATCATGAAGGAATTGAGTGGGAGCATAGAACATTCTTTTGCCCTACAAAACCTTACAGAGATAAAAATCAAGGGATGTGAAAAATTGGAAATAATTTTCTCCAATTCCTTTTCAACATGCCTACCACAATTGTGCGATCTAACAATAGAAAATTGCAAAGATTTGAAGCATATCATTGTAGATGACACGTCAAATTCTTTGTCCTCAATGACAGTCTTTCCAATGCTTAAAAGACTTGTTGTACTAAAGTGTCACAAATTGAAATGTGTCTTTCCGATCTCCATATGCAAAGAACTTTCTAGGTTAGAGGTTTTGATGATAATTGAAGCAGATGAACTTGAAGAAATATTCAAAAGCAATGGTGATCAGAAAGTCGAGATCCCAAATCTAAACCTTTTAGTATTTGCCCACCTACCAAGCCTCTTCGATACCCAAGGAATTCATTTTATGTTGGTAAAATTTCGTTTAGTACGAAATTGTCAAAAACTCCGCTGTTTGACTTCATCCTTAGTTTCCATACTTGTGGCTCGTTATTATTTGCAAGATCCTCAAATATTTTCGTATTTGTTTCATCGTACCGGTAATGAAAATCCAAGTGCAGAAACTACAAAAGATAGTGTTGGGATTAAAATTGAAGCAACATTCGGAGACGAGTTGACTTCTTCACAGAAGTTGGAGGCTGAACAATCCACAAGTCAACAAGATTCGATAAATCAACAGCATCCACTTGGTGAAATCGATACTGCCATCAAACCTTCTCAGTGTTTGAAAGAAACAAATCACCAAAATATTCAAGAGGACTATATGTCAGAAAAAACTGGAGCAGCAACTAAGTATTCCATTTCTGAAATAACGAATGAGCCACCTATACAATTAGTTTCTCCTAATAAACTAAAGGGTGTTGAAGAATGGGCTGCATTAAGAAATGCCAAGACAATAACAACCTCAACTAATTTAGAATTAGTCGATTCATCACAAATGAGTGAACAAGATGTTGATGTTAGATATTCTCTAGAAACTACCAAGGTTAATGATGATCAAGATTTTCAAAATAGTGAACATGTTGAGAGTCAATTTCAAAAATTAGAAGATACTGGTAATGAAAATTCAAGTGCAGAAACCACAAAAGATGTTGTGGTTGGTGTTGGGACTGAAGTTGAAGTACCATTAGGGCACAAACTGTCTTCTTCACAGATAATAACGAAACAAACACCACAAGCAGATCATGAATTAGCTGAAAATGTTTCTAATTTAGAGATACCGTCAGTTGCAGTATTGCCAACAAGTTCAAAAGAGTTGGAGAAAGAACAGCCACCAAGTGAACAACGTTTGATAAAACAACAAGATCCACATGGAGAAATCGATACTACCATCAAACCTTTGCAGGATGATGAAGAAGAAACTGCATTAACAAAAGACCCGAGAATAGCAGTCTCAACTCATTCAGAGGAACGAGATGTTGGTGTTAGAGATTCTCTAGAAACTACTACGATAAATGGTGATCAAGTTCCTCTAAATGAAGATGTTGTCCTAAAAGCAAGCTCAACTATTGAAGAAGAGTTTCCTAAGGGTGATGAATTTATTGTTTTAAAATCTAAGCCCTCTCCAAGAGATAATGATCCGTTGCCTCTTGCATTTCAAGCTCCTTCATTGCATTTTGAAGGGAATCCTTCTAAAAAAGTGGAAGATTTAGGTTATCCTTATCTTGTCACGCGGGAGTTGGAGGAACTTGTTTCCAAGAAGCATGTGAATCATGAGAACTTGCCTTTGTTGACTGATTTTTTTGTTAAGCATCCTTCAGTTCTTTTAAGGGACATTTCAATTAGTAACAGATACAAGGGTTATGCATACAACTGCCTAGCTGAGCTATTGAAATTCCTCCAAATCCATTGTGTTTGGGATGTATTAGGTTCAAGTCACTCTGAATTTGTTGAGTTATTACAAGATGTACGCAGATGTGGTTTTGATAAATATTGGTTGGATGGTGTTGAAAAACACGCTTTGTTTTCTGATTTACAATTCTCTCAAGATGCGTTGCAAAATGTTTTGGATTCCAAGAAACAGTTTACCAATGATGTCGAAGTACTGCGTTTCAAAATAGACATTTTAACTCAAAATATGGAAGATCTTAAGCAACAATTGTCCATCTCTGAAGCTAATTTGGAGAGAGTCATTCAACAGGAGAAAGAAATTGTAGAATCGAAGGCTGCTTTGAGTGCCCCTCTTGGCTATTAG 5823 0.3539 MESCLADLGKGCVEKLINGALAELRHVFCFTCTANEFKEKKIWLEAKIKTMEQHAKVAAGNDKDIEADYHLWKEKAEKLVQEDTQTKQKCFFGLCHDCIWRYKKGKELANNIEEIKQLTEKGGTFENIEISRRLPDVERYSSKEYISFPSRDSKYKEILDAIKDDNNYMIVLQGMGGTGKTTLAKEVGKELKSEEFAHVIDTTVSFTPDTKKIQDDIAGSLGLKWEDCTYSDRAKKLWSRLTTDEKVLIIMDDVWEGGPPLDFELIGIPKQDNHKGCKVLITTRSKRISNIMGCDKMIELDLLPEEEAWTMFKMYAGINNNSSKSLIATGREIAKECKQLPVAIAVIAKSLKGQQDRKHKWDTTLKLLKETVSMDDVDEEKVGIYKCLKLSYDLIMYEKSKILFLLASLFPEDKEIPIEILTRIGIGTGIFGKNYGSYNDARNQVGVAKDKLIDSCLLVGVDEKHVKMHDLVREAAQWIAYKEIRHVNLSNKDEKSSVEMEKNMKYLFCEGKDMDLSSWKYDCSKIETLILDVERDEDRRCMEVPKYFLENIDQLQVLYFSGHDKRPLSLPYSIHSLSKIRSILVDGVDLGDISVFGNLQSLETLDLVDCKINELPDEIAKLGKFKLLNLEYCQIQRNDPFEVIKRCKTLEELYFIDSFNEFCQEITLPELQRYHIRKGWTMLPDSLSKYVSFKKFDGNKYVFSKQTFKYLMQTTEGLQLEEIKMGWRNLMPEIVPIDQDMKDLIELRLRRISKLQCLIDTNGSQFLNVLSNLVMLELDEMENLEVLFHGSLSFDYSLKNLEKVSIKECKKLQILFNCKLNLCNLKTLSLSDCPLMVNLFPLLTSQSLVLLEEFKIADCKGLKNIVIDDGDNNDMSHGAMYPKLSFLSIVSCDQLESIFPFLSFEDFPVLEVINIKKCDKLQYIFGQYQHVELNSLKEIKLGELPNFMGICPEYSHSMSSLKNESSSTSRDGSKAQTQVDPIKCNILSLSCLCCHGNNYRKKSGSKSTTKVPSVNEDPMQNNSSESISSSHHLQIWERAQCFPVLPHIMCNVKELKLSGLLKIKSVFILSITPRMLVETLTIENCDELRHIILDIGDDDNVGKNLRNVFPKLKKLYVNDCMQLEYIFGHYTDDHLPELEGVTLSHLPKFVAMCPQQYCLTFPPLKQLELSECPLVAIKSIGEFIINLSDSKSLDNTIMKELSGSIEHSFALQNLTEIKIKGCEKLEIIFSNSFSTCLPQLCDLTIENCKDLKHIIVDDTSNSLSSMTVFPMLKRLVVLKCHKLKCVFPISICKELSRLEVLMIIEADELEEIFKSNGDQKVEIPNLNLLVFAHLPSLFDTQGIHFMLVKFRLVRNCQKLRCLTSSLVSILVARYYLQDPQIFSYLFHRTGNENPSAETTKDSVGIKIEATFGDELTSSQKLEAEQSTSQQDSINQQHPLGEIDTAIKPSQCLKETNHQNIQEDYMSEKTGAATKYSISEITNEPPIQLVSPNKLKGVEEWAALRNAKTITTSTNLELVDSSQMSEQDVDVRYSLETTKVNDDQDFQNSEHVESQFQKLEDTGNENSSAETTKDVVVGVGTEVEVPLGHKLSSSQIITKQTPQADHELAENVSNLEIPSVAVLPTSSKELEKEQPPSEQRLIKQQDPHGEIDTTIKPLQDDEEETALTKDPRIAVSTHSEERDVGVRDSLETTTINGDQVPLNEDVVLKASSTIEEEFPKGDEFIVLKSKPSPRDNDPLPLAFQAPSLHFEGNPSKKVEDLGYPYLVTRELEELVSKKHVNHENLPLLTDFFVKHPSVLLRDISISNRYKGYAYNCLAELLKFLQIHCVWDVLGSSHSEFVELLQDVRRCGFDKYWLDGVEKHALFSDLQFSQDALQNVLDSKKQFTNDVEVLRFKIDILTQNMEDLKQQLSISEANLERVIQQEKEIVESKAALSAPLGY 1940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07485 1940 PRINTS Disease resistance protein signature 337 351 - -
Vivi3g07485 1940 PRINTS Disease resistance protein signature 241 255 - -
Vivi3g07485 1940 PRINTS Disease resistance protein signature 169 184 - -
Vivi3g07485 1940 PRINTS Disease resistance protein signature 597 613 - -
Vivi3g07485 1940 MobiDBLite consensus disorder prediction 1630 1651 - -
Vivi3g07485 1940 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
Vivi3g07485 1940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 395 IPR027417 -
Vivi3g07485 1940 Gene3D Ribonuclease Inhibitor 508 870 IPR032675 -
Vivi3g07485 1940 MobiDBLite consensus disorder prediction 1625 1651 - -
Vivi3g07485 1940 Coils Coil 1889 1923 - -
Vivi3g07485 1940 Gene3D Ribonuclease Inhibitor 874 1339 IPR032675 -
Vivi3g07485 1940 FunFam Probable disease resistance protein At1g61300 132 297 - -
Vivi3g07485 1940 Gene3D - 135 299 IPR027417 -
Vivi3g07485 1940 SUPERFAMILY L domain-like 467 963 - -
Vivi3g07485 1940 MobiDBLite consensus disorder prediction 1000 1026 - -
Vivi3g07485 1940 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 909 1173 - -
Vivi3g07485 1940 SUPERFAMILY RNI-like 1041 1256 - -
Vivi3g07485 1940 Gene3D - 303 395 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07485 Vivi-Chr3 207164007 207196135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07485 170 487 WRKY Transcription Factor Family AT5G45050 25.526 1.69e-11 67.8