Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07477 ATGGCCGAGGTAATCAACTTACCTCCCGAATCTCACGACCGATCTCCTCCCACCACCACCACTGATCCTCCTCCTCAACCTCCTAATCCTCCTCATCAACCTCCACTCGACGACGATCTCCCACCTCCCTCTCTCCCTCGTCGGAGAGACTTCCGCGACGACAGGGATTTCGATCGCCGTCCTTTCCGCGGCGGCCGAGGCGGTGGACGAGGTGGTTTCTACAATCGTGACAAACGCCGTCGCAGCCCTAGCCCTAATTACCGTGACCGCCGCTATTCTCCTCCGCAGCAGCAGTCTCGACGTTCGCCTCCGCCGTTTAAGAGATCCAGAAGAGGGAGCCCGCATAGACCTAACGACAGATTTGGCTATGATCACTTTGGTGGCTATGAAAGGGGAGTGGGCGGAAGGGGTGGTTATGCAGATGATAGACCTGTTGGCAGGTTTCCACATCGATCTGCAGGGGGGTATCAAAACGGAATTTCTGATCTAGATGCCGCTCGCGGTTATGCAGATGGGCCAAGTGGAGGTGCTCGAAGAGAGGGATTAATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCATCTGAAGCGGAGCGTAGATACCAAGAGTACAAATCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATGCTCACAAAGATGAGGAATGGTTGAAAGATAAATATCATCCTACAAATTTACTTCCAGTTATTGAAAGGAGGAATGAAAATGCTCGGCGTCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTGGACATAAATCCAGGTTTAAACTCTGTATCCACTAGATCAGAGCAAGCCAGTGAGCCAAATTCAGAGGAGGAAACAGAAGCCGGTGGCAAACGAAGAAGACATGGTAGGGGATCTAATAAGGATAATGATTTCTCTGCTGCTCCAAAAGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGCTGAGATTCAACAGGTTCAGGCTGTTGTTCGGAAGCTTGACAAGGAAAAAGGGATCGAAGATAATATTTTATGCACCAATGATCATAGCAAAAATGGTGATAAGGCTCACAGTGGATCTGTGGGTCCTGTAATAATCATCCGTGGCCTAACTTCTATTAAGGGCTTAGAAGGCGTTGAGCTGCTGGACACACTGCTAACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGAATGCTTGAGATTAACGATGCCAAGGGTTTTAGGCATGTGAGACCAGAAGGAGCAAGGCATGAAGAAACTGGTAAATCGGGGTCAGAATGGGAGAAAAAGCTTGATTCATTTTGGCAGAGAAGGTTGGAAGGCCAGGATCCCTTGGAAGTAAGGACTGCAAAGGAGAAGATAGATGCTGCAGCAGCTGACATGTTGGATCCATATGTTAGAAAGATTAGGGATGAAAAGTATGGATGGAAATATGGCTGTGGAGCTAAGGGTTGCACAAAGCTTTTTCATGCAGTTGAGTTTGTGTACAAACATCTCAAGCTAAAACATCCTGAGCTTGTGTTGGAGCTAACATCAAAATTGCGTGAAGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACCCCTGTCATGCAGCAATCTCAGAAGGACAAGCCTTTAAAGCGCAGATTACTGGATGGTCGATTGAAAGATGATCGTGGGAATCAGCGAGACCAGGATAGGAATGACCGAACAAATGGAGACAGTTCTCCATCCCGTGAAAGGCGGTTGGGTGGCCGTGATGAAACCATGTTTGATGCATATGGAGGGCCTGCTGTACCTCAATTCTCCTCAGATATGCACCCTCCTCCTTCAGTTTTGATGCCTGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCATTTGATACCTCAGGGATGACTATGCGTTCTGGTCCTCAAATAGGGGGGCAGACTTCTATGATTGCGGTTCCTCCAGCCTTTAGACCTGATCCTCGACGGATGCGGAGTTATCAAGATTTGGATGCACCTGAAGAAGAAGTTACTGTTATTGATTATCGGAGTTTGTAA 2124 0.4727 MAEVINLPPESHDRSPPTTTTDPPPQPPNPPHQPPLDDDLPPPSLPRRRDFRDDRDFDRRPFRGGRGGGRGGFYNRDKRRRSPSPNYRDRRYSPPQQQSRRSPPPFKRSRRGSPHRPNDRFGYDHFGGYERGVGGRGGYADDRPVGRFPHRSAGGYQNGISDLDAARGYADGPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNAHKDEEWLKDKYHPTNLLPVIERRNENARRLAKDFLLDLQSGTLDINPGLNSVSTRSEQASEPNSEEETEAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQAEIQQVQAVVRKLDKEKGIEDNILCTNDHSKNGDKAHSGSVGPVIIIRGLTSIKGLEGVELLDTLLTYLWRIHGVDYYGMLEINDAKGFRHVRPEGARHEETGKSGSEWEKKLDSFWQRRLEGQDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTPVMQQSQKDKPLKRRLLDGRLKDDRGNQRDQDRNDRTNGDSSPSRERRLGGRDETMFDAYGGPAVPQFSSDMHPPPSVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSFDTSGMTMRSGPQIGGQTSMIAVPPAFRPDPRRMRSYQDLDAPEEEVTVIDYRSL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07477 707 MobiDBLite consensus disorder prediction 664 692 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 268 325 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 72 87 - -
Vivi3g07477 707 Pfam SERRATE/Ars2, N-terminal domain 186 267 IPR021933 -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 1 174 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 534 607 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 42 65 - -
Vivi3g07477 707 ProSitePatterns Zinc finger C2H2 type domain signature. 489 512 IPR013087 -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 550 596 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 283 306 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 18 41 - -
Vivi3g07477 707 MobiDBLite consensus disorder prediction 268 282 - -
Vivi3g07477 707 Pfam Arsenite-resistance protein 2 429 605 IPR007042 -
Vivi3g07477 707 PANTHER ARSENITE-RESISTANCE PROTEIN 2 46 705 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07477 Vivi-Chr3 206769293 206778880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07477 75 707 C2H2 Transcription Factor Family AT2G27100 60.029 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07477 K27103 - gmx:100817569 989.949