Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07470 ATGGCAACTATTGTTGCAGAAGCATTCCTATCAGCTTTTGTGGAAGTGTTACTAGAAAAGATGATTTCTCACGAGTTTATCGACTTCTTTAGACCCAAAAAGCTCGATGTTTCGCTCTTGGAAAATCTAAAAACAACACTCTTGAGTCTTCAATCAATACTAAATGATGCCGAGGAGAAACAGATCACAAATCATGCTGTCAAACAATGGCTGGAGAATCTGAGAGATGTTGTCTTTCAAGCTGATGATTTGTTTGACAAAATCAACACAGAGGCGTTACGATACAAAGTGGAAGCTGAATATCAAAGGAAAACAGTAAGTGCTAAGATGAAAAACATATTTTCTTCTAGTTTCAAACAGTTAAATTCTGAAATGCTAACACTCTTTGAAAGATTGGAACACTTTGCACAAAAAGGACACATTCTAGGATTGGAAGAAAGTGTTTCGTGCAATGTTTGGCATAGAACTCCAACAAGTTCTGTTGTAGATGAGTCTACTATATATGGAAGAGATTTAGACAGAAAAAAACTTAAGGATTTTTTACTGTCGGAAAATGGCAGTGATGTTGGTAAAGAAATAGGAGTAGTTTCCATTGTAGGCATGGGAGGGATCGGTAAAACAACCCTTGCAAAACTGCTTTACAATGATTCGGAAGTAATGGAGAAATTTGATTTGAAAGGGTGGGCATATATATCGAAAGATTTCGATATTGTTCAAGTCACTAAAACTCTTGTTGAATCTGTTACTTCAAAAACAAATGATACAACTAACCTGAATACTCCGTATTCTGAATTTGTCGCCTCAAAAAGAACCGATACGAGTGACCTGAATACTCTACAAGTGCAATTGAAGCAAAGTTTAAACCAAAAGAAGTTTTTGCTTGTATTGGATGACATATGGGATCGACGCTATATTGATTGGAACAATCTTAAGGATATCTTTAATGCAGGGAAAATCGGAAGTAAGCTCATCATCACAACACGAGATGAGAGAGTTGCGCTGGCGGTGCAAACCTTTCTTCCGATTCACTATTTGACACCTCTAGGAAGAGACGAGTGCTGGTCTTTACTTGCCAAACATGCATTTGGAGCATGTAATTTCCAGCAACAGTCAAAGCTAGAGGTGATTGGCAAAGAAATCGCTAAGAAATGTGATGGCTTACCATTAGCTGCAGTAGCAATTGGAGGTCTTCTTCGCATTAAATCGTCAGAGGATGACTGGAATATTGTCTTAAAAAGTAATGTATGGAGTTTGGAAAATGTTGAGGTGCAACCGGCTCTTTTTTTGAGCTATCATTATCTCCCCGCACCTTTAAAACGGTGTTTTGCTTATTGTTCAATTTTTCCCAAGAGCTCCAAGTTGAAAAAAAAGACGATAGTTGAGTTATGGATCGCAGAAGGCTTAGTACTTCAGTCTAAAAGTCAGAAAAGTTGGGAAAAGGTAGGAGAGGAATATTTTGATGAACTAGTGTCAAGGTCACTAATACATCGTCGACTAGATGATGGGGAAGCGAGCTTTGAAATGCACGACCTCATTCATGATTTAGCTAAAATGGTTTCCTATCCGTATTGTATCATGTTGGATGAAGAGGAGCTGCATGAAAGGGTACGCCATTTGTCATTCAATAGAGGGAAATATGACTCGTACGATAAATTTAAGAAACTGTATGGACTAAAAGGTTTACGCACCTTCCTGGCCTTACCATTACAACTATCATCACATTCTTGTTCCTTATCAAACAAGGTAGTTCGCGACTTTTTGCCAAGAATGAAACAGTTACGAGTTTTGTCTATGCTAAACTACACGAACATTACTGAGTTGCCTAACTCTATTGGAAATTTGATATACCTGCGATACTTGAATCTCTCTTACACTGGGATTGAAAGGTTGCCTTCTACAACGTGCAAACTTTACAATCTGCAAACCTTGTTGTTGTTACACTGTGGGAATCTCACTGAATTGCCTGAGGACATGGGAAAACTGATAAATCTACGCCATCTTGACATCAGAGGCACGCAATTGAAGGAGATGCCTGTACAAATTGCAAAGCTAACAAATCTGCAAACTCTATCAAACTTTATTATTAGCAAACAACATGATGGATTGAAAATTGCAGAGCTGGGAAAATTTCCTGATCTATATGGGAACCTTTACATCTCAAAGCTACAAAATGTTACGGCGGCCTCTGAAGCATTTCATGCAAATTTGAAGACGAAAGAAAAAATTGATTATTTGGTACTACAATGGGATCCACAAGACACTGCTACGAGTACGACTCAAGGTTCACAAATTCAAGGTTCTGTACTAGAGCAACTGCAACCCTCCACAAATTTGAAGAATCTTGGCATTTATAGATATGGTGGAACAAACTTTCCGAAATGGCTTGGCGATTCTACCTTTGGTAACATGGTGACAGTGAACATTGGTGGTTGTTACAATTGCTCACTGCTGCCACCCCTAGGAAAATTACCTTGTCTGAAAGCACTCTACATATATTGGATGGAATCTATAAGGAGTGTTGGTGTTGAGTTCTATGGAAGTAGCTGTCCTTCATTCCAACCTTTCCCTTCCTTAGAGAGACTAGAATTTAAGGATATGCCGGAATGGGAGGAATGGAACTTGTTTCCAGGTACAATTATAGAGTTTCCTAGTCTAAAATATCTATCAGTGGATAGATGTCCAAAACTCAAAGGAAACATACCAAGCACACTTCCATCTTTAACCGAACTTCACTTAAGCAATTGTGATCTATTGTTGAAAGCAACACATTCAGAAGATACTATTTTAAGGCCATCAAATCTATCTAGCCAACTGATGCTTTCTCTCAATTCTCTTCAAAAGTTGACATTAGACCGGTTTCCCTCTCTGACATCCTTCCCAGGAAACAGTCTACCCAAAACCTTACGATCTCTATCTCTACACTATTGTGAGAACCTCGACTTCCTCCATCAGGAATCCTTGCACAATTACACATCACTTGAGCAACTGTCAATTGAATACAGTTGTAATTCAATGACATCCTTTTCCTTGGGCTCTCTCCCAGTGCTTAAAAGCTTGTATATTAAAGGTTGCCAAAATCTCAAATCAATTTTTATTGCAAAAGATGCATCAGAGAGCCTCTCATTTATTCAAACTATCCAAATACAGTATTGTGATGAATTGGATTCATTTTTCCCCGACGGATTGTGCACTCCTAACCTCGTTTGTTTCGGCGTGTATGGGTGTAACAAGCTTATTACACTACCAGAACCAATGAACACTCTTGCTGGCCTTCAAGAATTGAGTGTTTTCAACCTTCCAAATCTAGAACATTTTGCCGCAGAGGGATTACCTGTCAATTTACGGAAACTTTCTGTTGGTGGGATTCAGTGGAATACACAGTGTAGTTTGGAAGAATGCTTGGATGGAAAGTGGCTCCACCATCTTACCTCTCTCAAAGACCTTGAGATTTCAGACGCTCCAAAGCTCAAATCATTGCCAGAAGAAGGGTTTCCTTCCTCTCTTTCTGTAGTGAATATCTCTGACTGTCCATTGTTGGAAGCAACTTGGCGGACGAAGAAAGGAAAAGAGTGGCGTAAGATAGCCCGCATTCCATGCATACTTATCAACTACAAAATGATCTCATGA 3627 0.3899 MATIVAEAFLSAFVEVLLEKMISHEFIDFFRPKKLDVSLLENLKTTLLSLQSILNDAEEKQITNHAVKQWLENLRDVVFQADDLFDKINTEALRYKVEAEYQRKTVSAKMKNIFSSSFKQLNSEMLTLFERLEHFAQKGHILGLEESVSCNVWHRTPTSSVVDESTIYGRDLDRKKLKDFLLSENGSDVGKEIGVVSIVGMGGIGKTTLAKLLYNDSEVMEKFDLKGWAYISKDFDIVQVTKTLVESVTSKTNDTTNLNTPYSEFVASKRTDTSDLNTLQVQLKQSLNQKKFLLVLDDIWDRRYIDWNNLKDIFNAGKIGSKLIITTRDERVALAVQTFLPIHYLTPLGRDECWSLLAKHAFGACNFQQQSKLEVIGKEIAKKCDGLPLAAVAIGGLLRIKSSEDDWNIVLKSNVWSLENVEVQPALFLSYHYLPAPLKRCFAYCSIFPKSSKLKKKTIVELWIAEGLVLQSKSQKSWEKVGEEYFDELVSRSLIHRRLDDGEASFEMHDLIHDLAKMVSYPYCIMLDEEELHERVRHLSFNRGKYDSYDKFKKLYGLKGLRTFLALPLQLSSHSCSLSNKVVRDFLPRMKQLRVLSMLNYTNITELPNSIGNLIYLRYLNLSYTGIERLPSTTCKLYNLQTLLLLHCGNLTELPEDMGKLINLRHLDIRGTQLKEMPVQIAKLTNLQTLSNFIISKQHDGLKIAELGKFPDLYGNLYISKLQNVTAASEAFHANLKTKEKIDYLVLQWDPQDTATSTTQGSQIQGSVLEQLQPSTNLKNLGIYRYGGTNFPKWLGDSTFGNMVTVNIGGCYNCSLLPPLGKLPCLKALYIYWMESIRSVGVEFYGSSCPSFQPFPSLERLEFKDMPEWEEWNLFPGTIIEFPSLKYLSVDRCPKLKGNIPSTLPSLTELHLSNCDLLLKATHSEDTILRPSNLSSQLMLSLNSLQKLTLDRFPSLTSFPGNSLPKTLRSLSLHYCENLDFLHQESLHNYTSLEQLSIEYSCNSMTSFSLGSLPVLKSLYIKGCQNLKSIFIAKDASESLSFIQTIQIQYCDELDSFFPDGLCTPNLVCFGVYGCNKLITLPEPMNTLAGLQELSVFNLPNLEHFAAEGLPVNLRKLSVGGIQWNTQCSLEECLDGKWLHHLTSLKDLEISDAPKLKSLPEEGFPSSLSVVNISDCPLLEATWRTKKGKEWRKIARIPCILINYKMIS 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07470 1208 FunFam Probable disease resistance protein At1g61300 152 338 - -
Vivi3g07470 1208 SUPERFAMILY L domain-like 508 918 - -
Vivi3g07470 1208 Gene3D Ribonuclease Inhibitor 706 902 IPR032675 -
Vivi3g07470 1208 Gene3D Ribonuclease Inhibitor 1110 1187 IPR032675 -
Vivi3g07470 1208 Gene3D Ribonuclease Inhibitor 903 1109 IPR032675 -
Vivi3g07470 1208 Gene3D - 348 429 IPR042197 -
Vivi3g07470 1208 Coils Coil 40 60 - -
Vivi3g07470 1208 Pfam Rx N-terminal domain 9 102 IPR041118 -
Vivi3g07470 1208 Gene3D - 430 518 IPR036388 -
Vivi3g07470 1208 Pfam NB-ARC domain 191 412 IPR002182 GO:0043531
Vivi3g07470 1208 PANTHER DISEASE RESISTANCE PROTEIN RP 40 863 IPR044974 GO:0006952
Vivi3g07470 1208 FunFam Probable disease resistance protein At1g63360 431 518 - -
Vivi3g07470 1208 PRINTS Disease resistance protein signature 902 918 - -
Vivi3g07470 1208 PRINTS Disease resistance protein signature 286 300 - -
Vivi3g07470 1208 PRINTS Disease resistance protein signature 384 398 - -
Vivi3g07470 1208 PRINTS Disease resistance protein signature 195 210 - -
Vivi3g07470 1208 Gene3D - 151 339 IPR027417 -
Vivi3g07470 1208 SUPERFAMILY RNI-like 874 1180 - -
Vivi3g07470 1208 Gene3D - 32 128 - -
Vivi3g07470 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 445 IPR027417 -
Vivi3g07470 1208 Gene3D Ribonuclease Inhibitor 526 705 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07470 Vivi-Chr3 206634747 206639478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07470 588 690 WRKY Transcription Factor Family AT4G12020 36.538 2.51e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07470 - - tpra:123916222 1931.38