Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07467 ATGGATTCTAATAGGCCGCTTTTGTTACAATCACCAAGAACTCCAAATGATCAAGAATTTCCAACACTTCCGGTATTTCCTGAATTACCGAAATCAAAGTCGAGTTCGAGCAACACAGTAACTTTCTCCGATGTGGAATATGGTATTCAAGTTTATAATAAGAACTCTTCAAACTCATCAACATCATCAAGTAAAAGCGCTATCTCAGGATCAAGAAAATCTGTGAGGTATGGTTCAAAAGGTGGTGGTGGAGGTGGAGGTGATTCTGATGGACTAAGCATGTCACAGAGAGAGTTAAGAGATGAAGATGCAAGATTGGTGTACATCAATGATCCTGATAAAACGAATGAGAATTTCGAGTTTTTCGGAAACTCGATAAGAACTGCTAAGTACTCAATTCTCACTTTCATTCCAAGGAATTTGTTTGAGCAGTTTCATAGAGTTGCTTATGTATATTTTCTCATCATTGCTATACTTAACCAGCTTCCTCAACTCGCGGTTTTCGGGAGATACGTTTCGATTCTACCGTTGGCTTTCGTTCTGTTTGTGACCGGTGTGAAAGATGCTTTTGAGGATTGGAGGAGACATAATTCAGATAAAGTTGAGAACAACAGGTTAGCATCAGTTTTGGTTCATGATGGTAGCTTCATTGACAAGAAATGGAAGGATATTAGGGTTGGTGAGATTTTGAAGATCAAAACAAATGAAACAATTCCCTGTGACATTGTTTTGTTGTCAACTAGTGATTCAACCGGTGTTGCGTATGTTCAAACTATTAACCTCGACGGGGAGTCGAATTTGAAGACTCGGTACGCGAAAATGGAGACAGGTTTAAAGATTCAACCGAGGTTTAACGGGTTGATCAAGTGTGAGAAACCGAATAGGAATATTTACGGATTTATGGCGAATATGGAGATTGATGGGAAGAAGTTATCGCTCGGATCAACCAACATTGTGCTTAGAGGATGTGAGCTCAAGAATACTAGTTGGGCGCTTGGTGTCGCGGTCTACTGCGGCCGCGACACCAAAGCTATGCTCAACAGTTCTGGAGCTCCGTCGAAGAGGAGTCGGCTAGAGACACGGATGAACTACGAAATCATTATGCTGTCGTTTTTTCTTGTTGCATTGTGTACGATTACGTCGGTTTGTGCTGCGGTTTGGTTGAAGCGCCATAAAGACGAGCTGGATCTGTTGCCTTATTATAGGAAACTTGATTTTTCGGAGGCGAAAGTTAAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTATCAGGTCATGATTCCTATTGCTTTGTATATTTCTATGGAGCTTGTTCGCGTTGGTCAGGCCTATTTCATGATCGAAGACGATCGATTGTTTGATAAAGCTACGAATTCGAGGTTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGACAGATTAAGTATGTGTTCTCTGATAAAACCGGTACACTTACCGAGAATAAGATGGAGTTTCAATGTGCTAGCATTTGGGGAGTTGATTATAGTTCCACAAAAGCCAGCATGGAGGATGAACAAACCGAATACTCGGTGCAAGTTGATGGAAAGATGTTGAAACCGAAGATGAAGGTGAAAGTTAATCTCGAGCTTTTGAAATTGGCGAGAAATGGATATCAAAATGCGGAAGGAAAAAGGATTTACGAGTTCTTTCTAGCGCTTGCAACGTGTAATACTATTGTGCCTCTTGTTGTTGACACACCTGATCCTGATGTCAAACTGTTAGATTACCAAGGTGAATCGCCCGATGAACAAGCATTGGCGTACGCTGCGGCTGCCTATGGTTTTATGCTCATCGAACGAACCTCTGGACACATCGTCATTGATATTCATGGAGAAAGACTAAAGTTCAATGTCTTGGGTTTACATGAATTCGACAGTGATCGAAAAAGAATGTCGGTTATATTAGGCTACCCTGACAATTCAGTAAAACTCTTTGTCAAAGGAGCCGACACGACCATGTTTAGTATAATCGACAAATCATACAACATGGACTTGATAAAATCGACAGAAACTCATCTTCACTCGTATTCATCTCTCGGTTTACGAACACTTGTGATTGGAATGAGAGAACTCAACACTTCAGAGTTCGAACAATGGCACGCATCCTACGAAGCAGCGAGCACCGCAGTGTTCGGTAGGGCTGCAATGCTTAGAAAAATTTCAAACCATGTTGAAAACAATGTCTGCATATTAGGAGCTTCTGCTATCGAAGATAAACTTCAACACGGCGTACCAGAGGCAATCGAGTCTCTAAGGGCAGCAGGGATTAAGGTTTGGGTGTTAACCGGTGACAAGCAAGAAACTGCTGTATCGATCGGATTCTCGTCGAAACTCTTAACAAGAAGCATGACTCAGATTATTATTAGTAGTAACAATAAAGCTTCGTGTAGAAAAAGTCTCAAAGATGCTCTTGAAAGATCTAGAAAACTTGATGCGGTTTCAACGCAGATCGCTTTGATTATCGATGGTGGAAGTCTCGTTCACATTCTCGATACTGATCATGAAGAAGAGCTATTTCAACTTGCGAGTTTGTGTTCCGTTGTTCTTTGTTGTCGAGTTGCTCCTTTGCAAAAAGCCGGTATTGTTTCGCTTGTGAAGAAGAGAACATCTGACATGACACTAGCCATTGGAGACGGTGCTAATGATGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGTATCAGTGGTCAAGAGGGTAGGCAAGCTGTAATGTCATCGGATTTCGCAATGGGACAGTTTAGGTTCTTAGTTCCTCTCTTGTTGGTTCATGGTCACTGGAATTACCAAAGGCTTGGTTACATGATTCTTTACAATTTCTACAGAAATGCTGTCCTGGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCGTTCACTTTAACAACCGCTATAAACGAATGGAGTTCCACATTGTATTCGATAGTCTACAGCGCACTACCGACTATCATTGTCGGAATTCTCGACAAAGATCTCGGAAGAAGCACTCTCCTAAGGTATCCTCAGCTTTATAGTGCTGGTCAAAGAAATGAAGCTTACAACAAGAAACTGTTTATGTTAACAATGGCTGATACTTTGTGGCAAAGCATGGTTATATTTTGGCCTCCACTCTTTGCATATTGGAAAAGTACTATTGATGTAGCAAGTATAGGAGATCTCTGGACTTTGGCAGTGGTTATTATTGTCAATTTACATTTGGCTATGGATGTTGTAAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTGTTGCTACTTTCATTGCTGTCATGATCATTGATTCTATACCTAAACTTCCTGGTTTCTGGGCCTTCTTTCATGTTGCGAATACAGGATTATTCTGGGCATTGTTGCTAGGAATTATCATAGCAGCATTACTTCCACGTTTGGTTGTAAAGTTTATCTATCAATACTATTTTCCAAGTGATATTCAAATTTCTAGAGAAGCTGAAAAAATGAGACAAGATCAAAGAGTTGCTGAAAATCGACAAATAGAAATGCTTCCTGTCTCATATCATCAACAAACATGA 3594 0.4051 MDSNRPLLLQSPRTPNDQEFPTLPVFPELPKSKSSSSNTVTFSDVEYGIQVYNKNSSNSSTSSSKSAISGSRKSVRYGSKGGGGGGGDSDGLSMSQRELRDEDARLVYINDPDKTNENFEFFGNSIRTAKYSILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLASVLVHDGSFIDKKWKDIRVGEILKIKTNETIPCDIVLLSTSDSTGVAYVQTINLDGESNLKTRYAKMETGLKIQPRFNGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRDTKAMLNSSGAPSKRSRLETRMNYEIIMLSFFLVALCTITSVCAAVWLKRHKDELDLLPYYRKLDFSEAKVKDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLFDKATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKASMEDEQTEYSVQVDGKMLKPKMKVKVNLELLKLARNGYQNAEGKRIYEFFLALATCNTIVPLVVDTPDPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERLKFNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTTMFSIIDKSYNMDLIKSTETHLHSYSSLGLRTLVIGMRELNTSEFEQWHASYEAASTAVFGRAAMLRKISNHVENNVCILGASAIEDKLQHGVPEAIESLRAAGIKVWVLTGDKQETAVSIGFSSKLLTRSMTQIIISSNNKASCRKSLKDALERSRKLDAVSTQIALIIDGGSLVHILDTDHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIVYSALPTIIVGILDKDLGRSTLLRYPQLYSAGQRNEAYNKKLFMLTMADTLWQSMVIFWPPLFAYWKSTIDVASIGDLWTLAVVIIVNLHLAMDVVRWYWVTHAVIWGSIVATFIAVMIIDSIPKLPGFWAFFHVANTGLFWALLLGIIIAALLPRLVVKFIYQYYFPSDIQISREAEKMRQDQRVAENRQIEMLPVSYHQQT 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07467 1197 CDD P-type_ATPase_APLT_Dnf-like 123 1053 - -
Vivi3g07467 1197 Gene3D - 596 726 IPR023299 GO:0000166
Vivi3g07467 1197 SUPERFAMILY Calcium ATPase, transduction domain A 210 344 IPR008250 -
Vivi3g07467 1197 FunFam Phospholipid-transporting ATPase 749 935 - -
Vivi3g07467 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 492 498 IPR018303 -
Vivi3g07467 1197 MobiDBLite consensus disorder prediction 1 39 - -
Vivi3g07467 1197 MobiDBLite consensus disorder prediction 53 73 - -
Vivi3g07467 1197 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g07467 1197 SUPERFAMILY HAD-like 485 941 IPR036412 -
Vivi3g07467 1197 Pfam Cation transport ATPase (P-type) 595 673 - -
Vivi3g07467 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1162 IPR023298 -
Vivi3g07467 1197 Pfam Phospholipid-translocating P-type ATPase C-terminal 923 1163 IPR032630 -
Vivi3g07467 1197 PRINTS P-type cation-transporting ATPase superfamily signature 490 504 - -
Vivi3g07467 1197 PRINTS P-type cation-transporting ATPase superfamily signature 895 914 - -
Vivi3g07467 1197 PRINTS P-type cation-transporting ATPase superfamily signature 773 783 - -
Vivi3g07467 1197 FunFam Phospholipid-transporting ATPase 594 727 - -
Vivi3g07467 1197 NCBIfam HAD-IC family P-type ATPase 865 981 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g07467 1197 FunFam Phospholipid-transporting ATPase 179 347 - -
Vivi3g07467 1197 Pfam Phospholipid-translocating ATPase N-terminal 107 174 IPR032631 -
Vivi3g07467 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 496 763 IPR023299 GO:0000166
Vivi3g07467 1197 Pfam E1-E2 ATPase 208 448 - -
Vivi3g07467 1197 Gene3D - 186 347 - -
Vivi3g07467 1197 MobiDBLite consensus disorder prediction 53 95 - -
Vivi3g07467 1197 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 99 1176 - -
Vivi3g07467 1197 NCBIfam phospholipid-translocating P-type ATPase 121 1170 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi3g07467 1197 SFLD p-type atpase 474 946 IPR044492 -
Vivi3g07467 1197 SFLD Haloacid Dehalogenase 474 946 - -
Vivi3g07467 1197 PRINTS Sodium/potassium-transporting ATPase signature 483 504 - -
Vivi3g07467 1197 PRINTS Sodium/potassium-transporting ATPase signature 972 992 - -
Vivi3g07467 1197 Gene3D - 746 935 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07467 Vivi-Chr3 206595381 206601136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07467 62 1181 Primary Pumps ATPases AT5G04930 69.496 0.0 1655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07467 K14802 - gmx:100813982 1830.84