Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07454 ATGTCAATTGACCTTGCTGCAAGTAAAAGGGAGAAAATCCATGTCGCACCGGAGGTTGCGGAAATCCTTGCCATTCGTTGGAGCCTTCAGTTAGCAAAGGAATTGAAGCTGAATTGCCTTATCATCCAGTCAGACGCCCTCACTGCTGTTGACTGCATCAATGGTATCGTAGAAGACGCGGTTTTGGAGCCTATTGCAGCGGATTGTCGTTTCTTTCTCAGTAGCTTTTCTTGCGCTTCTGTTATGTTCATTAGAAGGACTGATAATGTAGATGCTCATAATCAATTTAATAAATATATTGTCGATCATGTTGTAAAGAGAAAACAATACCAAATCCCAAACGTCAAGAAATGGCTTGGCGATGTGAAACATGCTATGTATGAGGCTGACCAACTCCTGGATGAGATTGCCACTGCTGCACCGTTGAAGAAGATGAGACTCGAATCTCAACCTTCTACTAGCAACAACTTTTTCAGCTATGTTTCAGCTTTTATTAATCCGTTTGAATCGCGGATCAAAGAAATGATAAAGAGTCTAAAACATCTTGCAGAGCAAAAAGATGTGTTGGAATTGAAAAATGGAACGTGTGCTCGTAATGAAGTTGGTGTCAGTTTGAAACTTGTAGAAAGATTGCCAACTTCATGTTTGCTGGGTGGATCAGACATATATGGTAGAGATAATGACAAAGATGAAATGATCAAAATTTTACTTTCAAATAATGGCGGAGGCAACCGTACACCTGTATCCAGCATTGTGGGTCTCGGTGGGATGGGCAAGACCACCTTTGCTAAGCTTGTGTACAATGAAAGTAGGATTGAGGAACATTTTGAACTTAAAGCATGGGTTTATGTTTCAGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTACAGTCATTTCATTCTTCTGCAGACGATGAATTCAAAGCAATTATCAAGTCATTTAATTCTTCACTAGACGATGAACATATTTTCAATTTACTCCAACAAAGACTGCAACATGTATTAACAGGAAAAAAATACTTGCTTGTTTTGGACGATATCTGGAACAAAAATGCGGAATGTTGGGAGCAGTTACTTCTTCCATTTAATCATGGATCTTCTGGAAGTAAGATTATTGTGACAACACGTGACAAGGAGGTAGCAAATGTCCTGAATTCCACCAATATATTTGATTTACATCAACTGCAAAGAAGAGATTGTTGGAGTTTATTTGTGGCACATGCGTTTCTTGGCAAGAATGCATGTGAATATCCAAATCTTGAATCTATTGGAGCGAAAATAGTGGACAAGTGCGGAGGGTTGCCTTTAGCTGTGAAAACATTGGGCCAACTTTTGCGGAAAAATTTCTCTCAACATGAATGGATGAAGATATTGGAGACTGATATGTGGCGTTTATCAGATAGGGAAAACAACATTAACCCAGTTCTAAGATTGAGTTACCATAAACTCCCGTCCAATCAAAAGCGTTGTTTTGCGTATTGCTCTATATTTCCTAAAGGTTATTCCTTTGACAAAGGTGAATTAATCAGGTGTTGGATGGCAGAAGGTTTGTTGAAGTGTTACGGAACAGAAAAAAGCGAAGAAGAAGTGGGGAATGAAATTTTTTGTGATCTAGAGTCAATTTCATTTTTCCAAAAACCGCTATTTCATTATAACACCTTTGTCATGCATAGTCTTGTGAAAGAATTAGCAAATTCAATTTCAGGAGAGTTTTGTATGCAAATAGAAGGTGCTAGGGTGGAAGGTATCCTTGAAAGGACACGTCACATTCGGTGCTCTCCTCAATTAAACTGTGTTGATAAATTACTAGAGTCAGTTTGTAAACTTAAGGGACTACGTAGTCTAACACTGAAAGGAAATGGAGCTATATCGATAAACAACAATGTGCAACATGATCTGTTTTCAAAACTAAAGTGTTTGCGGATGTTATCATTTAGATATTGTGTCATCTCGGAACTAGTTGATACGGTAAGCAATTTAAAGCTTTTGCGTTATCTAGACCTTTCTTACACTAAGATTACTAGCTTGCCTGATACCATTTGTATGTTGTATAATTTGCAAACACTCTTGTTGCGTGACTGTTATGAATTGACCGAGCTCCCTTCAAATTTTTCAAAACTGATCAATTTACGTCATCTGGAACTTCCCTATTATATAAAGAAGTTGCCGAAGCATATAGGAAGTCTAAGAAATCTCCAGGCCTTGCCTTATTTTATAGTGGAAGAGAAGAATGGATCTGATCTTAAAGCGTTGGAGAAACTAAACCATCTTCATGGAACAATTCATATTAAAGGATTGGGTAATGTCATTGATCTTTCAGATGCTGCAACAAGCCTTATGAAAGATAAGAAGTATTTAGAAGAAATACATATGACATTCGATGACGGAAGAGAAGATATGGATGGTTTAATAGTTGAAGGCAATGTGTCTGTCTTGGAGGCTCTTCAACCAAATAGCAACTTGAGTAGGCTCATCATTGAGAACTACAATGGCATTATGTTTCCAAATTGGATAAGAGGTTGCCATTTACCCAACTTAGTATCTCTTAAACTGAAGTACTGTGGTTTATGTTCTCATTTCCCGCCACTCGGGCAGCTCCCCTCTCTCAAAGAGCTTTCTATTTCAAACTGTCATGGAATAAAGATTATCGGCAAAGAGTTCTACGGCAATAACTCAACAAACGCTCCGTTCAAGTCCCTTGAAGTTTTGAGATTTGAGACAATGAACAGCTGGGAGGAATGGCATTGTCTTGAAGGGTTTCCTTCGCTTAAAGAGCTTTCTATAAGAGATTGTCCGAAATTGAAAAGAGCGCTTCCTCAACACCTTCCTTCTTTGCAAATACTAAAGATTTATAATTGCAAAGCGTTGGATGCAACAATTCTGAAAATTGATAATATCATAGAGTTAGATCTACAAAGATTTGATCGGATTTTGGTAAATGAATTGTCGTCTAGCTTGAAAAAGGTGGTCCTTAGTAGAAATCGCTACACTATGTTTTCCCAAGCGCAAAACTTATTCAACAGTCTCATTCTGGAAGAGTTGCATTTGGATTTTAGTGGCTTTGTAAAATGTCCTTCTTTGAATTTGCATTGCTATAATTCTCTTTGTAAACTTTCAATGGTAGGATGGCGGTCTTCCTCCTTGCCTTTTCCACTGCACTTGTTCATCAATCTTGATTCTCTCTGTTTGTCTGATTGTCTAGAGCTGAAATCTCTTCCTATAGAAGGTTTGCCTCCCAACTTGACATACCTTGAAATACGCAATTGCCCGCAGTTGGAATCCTTTCCTATTGGAGGTATGTCTTCCAAATTGAGACACCTTCAATTACACAATTGCCCAAGACTACTTGCTTTGAGAGAGGAGTGGTGTTTGCTTCAACTCAATTCCCAAGGTTGA 3402 0.3827 MSIDLAASKREKIHVAPEVAEILAIRWSLQLAKELKLNCLIIQSDALTAVDCINGIVEDAVLEPIAADCRFFLSSFSCASVMFIRRTDNVDAHNQFNKYIVDHVVKRKQYQIPNVKKWLGDVKHAMYEADQLLDEIATAAPLKKMRLESQPSTSNNFFSYVSAFINPFESRIKEMIKSLKHLAEQKDVLELKNGTCARNEVGVSLKLVERLPTSCLLGGSDIYGRDNDKDEMIKILLSNNGGGNRTPVSSIVGLGGMGKTTFAKLVYNESRIEEHFELKAWVYVSESFDVVGLTKAILQSFHSSADDEFKAIIKSFNSSLDDEHIFNLLQQRLQHVLTGKKYLLVLDDIWNKNAECWEQLLLPFNHGSSGSKIIVTTRDKEVANVLNSTNIFDLHQLQRRDCWSLFVAHAFLGKNACEYPNLESIGAKIVDKCGGLPLAVKTLGQLLRKNFSQHEWMKILETDMWRLSDRENNINPVLRLSYHKLPSNQKRCFAYCSIFPKGYSFDKGELIRCWMAEGLLKCYGTEKSEEEVGNEIFCDLESISFFQKPLFHYNTFVMHSLVKELANSISGEFCMQIEGARVEGILERTRHIRCSPQLNCVDKLLESVCKLKGLRSLTLKGNGAISINNNVQHDLFSKLKCLRMLSFRYCVISELVDTVSNLKLLRYLDLSYTKITSLPDTICMLYNLQTLLLRDCYELTELPSNFSKLINLRHLELPYYIKKLPKHIGSLRNLQALPYFIVEEKNGSDLKALEKLNHLHGTIHIKGLGNVIDLSDAATSLMKDKKYLEEIHMTFDDGREDMDGLIVEGNVSVLEALQPNSNLSRLIIENYNGIMFPNWIRGCHLPNLVSLKLKYCGLCSHFPPLGQLPSLKELSISNCHGIKIIGKEFYGNNSTNAPFKSLEVLRFETMNSWEEWHCLEGFPSLKELSIRDCPKLKRALPQHLPSLQILKIYNCKALDATILKIDNIIELDLQRFDRILVNELSSSLKKVVLSRNRYTMFSQAQNLFNSLILEELHLDFSGFVKCPSLNLHCYNSLCKLSMVGWRSSSLPFPLHLFINLDSLCLSDCLELKSLPIEGLPPNLTYLEIRNCPQLESFPIGGMSSKLRHLQLHNCPRLLALREEWCLLQLNSQG 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07454 1133 Pfam NB-ARC domain 227 482 IPR002182 GO:0043531
Vivi3g07454 1133 Pfam Reverse transcriptase-like 12 93 IPR002156 GO:0003676|GO:0004523
Vivi3g07454 1133 Gene3D Ribonuclease Inhibitor 964 1131 IPR032675 -
Vivi3g07454 1133 PRINTS Disease resistance protein signature 336 350 - -
Vivi3g07454 1133 PRINTS Disease resistance protein signature 866 882 - -
Vivi3g07454 1133 PRINTS Disease resistance protein signature 433 447 - -
Vivi3g07454 1133 PRINTS Disease resistance protein signature 248 263 - -
Vivi3g07454 1133 Gene3D - 210 392 IPR027417 -
Vivi3g07454 1133 Gene3D - 5 105 IPR036397 GO:0003676
Vivi3g07454 1133 PANTHER DISEASE RESISTANCE PROTEIN RP 118 933 IPR044974 GO:0006952
Vivi3g07454 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 496 IPR027417 -
Vivi3g07454 1133 CDD RNase_H_like 7 93 IPR044730 -
Vivi3g07454 1133 Gene3D Ribonuclease Inhibitor 592 963 IPR032675 -
Vivi3g07454 1133 Gene3D - 396 481 IPR042197 -
Vivi3g07454 1133 ProSiteProfiles Leucine-rich repeat profile. 664 685 IPR001611 GO:0005515
Vivi3g07454 1133 Coils Coil 172 192 - -
Vivi3g07454 1133 SUPERFAMILY RNI-like 899 1126 - -
Vivi3g07454 1133 Gene3D - 482 568 IPR036388 -
Vivi3g07454 1133 FunFam Probable disease resistance protein At1g61300 215 389 - -
Vivi3g07454 1133 SUPERFAMILY L domain-like 557 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07454 Vivi-Chr3 206296051 206306492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07454 244 506 WRKY Transcription Factor Family AT5G45050 25.000 2.24e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07454 - - vvo:131659801 2268.81