Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07452 ATGACAGAACTAGTTGCTGGAGCATTTCTTTCGTCTTTCTTTCAAGTGATTTTTGATAAGTTGGCTTCAAGTAATTTCACAGACTATTTCCGTAGAGGAAAACTTGACAAGTTGGTAGAGGAACTTGAGTCTACACTCGAGTCTATCAACCAAGTGTTGGATGATGCAGAGATAAAGCAATACCAAATCCCAAATGTCAAGAGATGGCTTGGTAATGTTAAACATGCTATGTATGAGGCTGACCAACTACTGGATGAGATTGCCACTGATGCACCGTTGAAGAAGATGAGAGTCGAATCTCAACCCTCCACCAGCACTATATCCAACTTCATTCCAACTTTTACTAATCCATTTAAATCTAGGCTCAAAGAATTGATAGAGATCCTAGATTCTCTTGCAGAGCAGAAGGATAAGCTGCAGCTGAAAACAAGAGTGCGTGCTTATAATGGAGATGGAGCTGATTCGAAATTTTCAGAAAGACTACCAACTACATATTTGGTGCATGCGTCCCAGATATATGGTAGAGATGATGAGAAAGATGAAATGGTCAAACTTTTACTTTCAAACAATGACAGTGGCAACCAGACACCGACACCTGTATCTAGCATAGTGGGTCTGGGAGGGATGGGCAAGACCACCTTTGCTAAGCTTGTGTACAATGATAGTAGGATTGAAGATCATTTTGAACTTAAAGCATGGGTTTATGTTTCTGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCAAGTCATTTCATTCTCCAGTTGATAATGAAACTATTCTCAATTTACTTCAACAGAGACTACAACTCATACTAGCAGGCAAAAAATACTTGCTGGTTTTAGATGATATCTGGAACGGTAATGCAGAATTTTGGGAGCAATTACTACTTCCTTTTAACCATGGATCTTATGGAAGTAAGGTTATAGTAACAACACGTGACAAGGAGGTAGCAAATGTTTTGAAATCCACCAAGTTACTAGATTTACAGAATTTGGGGAAAAGCGACAGTTGGAGTTTATTTGCAACACATGCGTTTCGTGGCAAAAAAGTGTGTAAAAATCCAAACCTTGAATCAATTGGCAAAAGAATTGTGGAGAAGTGTGGAGGATTGCCTTTAGCTGTAAAAACAATGGGCCAACTCTTGCGAAAAAAATTCTCTCAGCATGAGTGGATGAAGATATTGGAGACTGATATGTGGCGTTTATTAGATGGGGACAACAACGTTAACCCAATGTTAAGATTGAGTTACCATAATCTCCCTTCTAATTTAAAGCGTTATTTTGCTTTTTGTTCTACATTTCCTAAAGGTAGTCAAATTCGCAAAGATAAATTAATCAAGCTTTGGATGGCTGAAGGTTTGTTGAAGTGTTGTAGACAAGAAAAAAGTGAAGAAGAGTTGGGTAATGAAATTTTTGGTGATCTTGAGTCAATTTCATTTTTCCAACAATCAACGAATGATAATATTTTTTCATATATCCAACAAATAACGAATGATAATATTTTTTACACGCATGACCTTGTCAATGATTTAGCTAAATCAGTGTCAGGAGAATTTTGTATGCAAATGGACAAAGTTAAGGAGGAAGGTATCCCTGAAAGAACACGTCACATTAGATGGTCTCTTTCATTAAATAGTACATGTGTTGATAAAATACTAGAGTCACTTTGTGAGCTTAAAGGACTACGTAGTCTGATACTAGAAGGCAATGGATATATGTTAATAAGCAACACTGTGCAGCGTGATATGTTTTCAAACACTGTGCAGCGTGATATGTTTTCAAGACTAAAATATTTGCGAATGTTATCATTCAGTCGTTGTAGTCTCTCAGAGGTAGTTGATGAGATAAGCAATTTAAAGCTTCTGCGTTATCTAGACCTTTCTCATACTAGAATTTCACGCTTACCTGACACCATTTGTTTGTTATGTAATTTGCAAACACTCTTGTTGGATTGCTGTTCTAAATTGACTGAGCTCCCTTCAAATTTTTCCAAACTCATCAATTTACGTCATCTTGAACTTCCCTATTCTGTAAAGAAGACACCAAAGAATATAGGAAGCCTAATCAATCTCCAGAACTTGGCTTATTTTATAGTGGAAGAGCAGAACAGATCAGATCTTAAGGAGTTGGAGAAACTAAATCATCTTCGTGGAAGAATTCAAATTAAAGGGTTGGGTAAAGTCATTGATCCTACAGATGTTACAACAAGAAGTTTGAAAGATAAGAAGTATTTGGAAGAAATAGAGATGACATATGATGGCGGAAGAGAAGATATGGATAGATCAACTGTTGAAAGCAATTTATCTGTCTTGAAGGCTCTTCAACCAAATAGTAACTTGAAGAAGCTCACCATCAGAGAGTACAGAGGTAATAGGTTTCCAAATTGGGTAAGTGGTTGTCATTTACCCAACTTAGTATCTCTTACATTGGAGAATTGTGGATTATTTTCCCATTTGCCACCACTTGGGCAGATCCCTTATCTCAAGAAGCTTTATATTTCAGGCTGTCATGGAATAAAGATCATCGGAAAAGAGTTTTCTAGCAATAACTTCAAGTCTCTTGAATTTTTAAGTTTCAAGAGCATGAAGAATTGGAAGGAATGGTTATGTATTGAAGGATTTCCTTTACTTACAGAGCTTTCTATAAAAAATTGTCCCAAATTGAAAAGGGTGTTGCTTCCACACCTTCCTTCTTTACAGAAGTTGATATTTTCTAATTGCAAAATGTTGGACGTATCAATTCCCAATTGTGATAAAGTCATAGAGTTGTATACATGGAATTGTAAGCGGATTTTGATAAATGAGTTGCCATCCAGCTTGAAAAGGTTTGTCCTTCGTGAAAATGAGTATGTCGAGTTTCCCATGGTTCATTTAATCAACAATCCCAGTCTGGAAGTGTTGGAGTTGGATTTCAAGGACATTGTAGAATGTCCCTCATTGGATTTGTGTTGTTATAATTCTCTTTGGAGACTTTCAATAACAGGATGGCAGTCCTCCTCCTTGCCTTTTTCACTACACTTGTTCTCCAATCTTAGTGATCTAAAGTTGCGTAATTGTCCAGAATTAGAATCTTTTCCTATGGGAGGTATCCCTTCCAACTTGATCAAACTTGGAATATTTAATTGTCCTAGTCTTGAGCACTTGCCAGAGGAGTGGGGTTCCCTTTCTCAGTTGGAGATTGAAGATTGTCCATTACTTAAAGAGAAGTACCAAAAGGAGTGA 3228 0.3696 MTELVAGAFLSSFFQVIFDKLASSNFTDYFRRGKLDKLVEELESTLESINQVLDDAEIKQYQIPNVKRWLGNVKHAMYEADQLLDEIATDAPLKKMRVESQPSTSTISNFIPTFTNPFKSRLKELIEILDSLAEQKDKLQLKTRVRAYNGDGADSKFSERLPTTYLVHASQIYGRDDEKDEMVKLLLSNNDSGNQTPTPVSSIVGLGGMGKTTFAKLVYNDSRIEDHFELKAWVYVSESFDVVGLTKAILKSFHSPVDNETILNLLQQRLQLILAGKKYLLVLDDIWNGNAEFWEQLLLPFNHGSYGSKVIVTTRDKEVANVLKSTKLLDLQNLGKSDSWSLFATHAFRGKKVCKNPNLESIGKRIVEKCGGLPLAVKTMGQLLRKKFSQHEWMKILETDMWRLLDGDNNVNPMLRLSYHNLPSNLKRYFAFCSTFPKGSQIRKDKLIKLWMAEGLLKCCRQEKSEEELGNEIFGDLESISFFQQSTNDNIFSYIQQITNDNIFYTHDLVNDLAKSVSGEFCMQMDKVKEEGIPERTRHIRWSLSLNSTCVDKILESLCELKGLRSLILEGNGYMLISNTVQRDMFSNTVQRDMFSRLKYLRMLSFSRCSLSEVVDEISNLKLLRYLDLSHTRISRLPDTICLLCNLQTLLLDCCSKLTELPSNFSKLINLRHLELPYSVKKTPKNIGSLINLQNLAYFIVEEQNRSDLKELEKLNHLRGRIQIKGLGKVIDPTDVTTRSLKDKKYLEEIEMTYDGGREDMDRSTVESNLSVLKALQPNSNLKKLTIREYRGNRFPNWVSGCHLPNLVSLTLENCGLFSHLPPLGQIPYLKKLYISGCHGIKIIGKEFSSNNFKSLEFLSFKSMKNWKEWLCIEGFPLLTELSIKNCPKLKRVLLPHLPSLQKLIFSNCKMLDVSIPNCDKVIELYTWNCKRILINELPSSLKRFVLRENEYVEFPMVHLINNPSLEVLELDFKDIVECPSLDLCCYNSLWRLSITGWQSSSLPFSLHLFSNLSDLKLRNCPELESFPMGGIPSNLIKLGIFNCPSLEHLPEEWGSLSQLEIEDCPLLKEKYQKE 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07452 1075 Gene3D - 419 517 IPR036388 -
Vivi3g07452 1075 Gene3D - 14 141 - -
Vivi3g07452 1075 PANTHER DISEASE RESISTANCE PROTEIN RP 39 924 IPR044974 GO:0006952
Vivi3g07452 1075 Coils Coil 35 59 - -
Vivi3g07452 1075 Gene3D - 155 329 IPR027417 -
Vivi3g07452 1075 Pfam NB-ARC domain 178 419 IPR002182 GO:0043531
Vivi3g07452 1075 Pfam Rx N-terminal domain 9 95 IPR041118 -
Vivi3g07452 1075 ProSiteProfiles Leucine-rich repeat profile. 623 644 IPR001611 GO:0005515
Vivi3g07452 1075 PRINTS Disease resistance protein signature 200 215 - -
Vivi3g07452 1075 PRINTS Disease resistance protein signature 619 635 - -
Vivi3g07452 1075 PRINTS Disease resistance protein signature 273 287 - -
Vivi3g07452 1075 PRINTS Disease resistance protein signature 370 384 - -
Vivi3g07452 1075 SUPERFAMILY RNI-like 852 1065 - -
Vivi3g07452 1075 Gene3D - 333 418 IPR042197 -
Vivi3g07452 1075 SUPERFAMILY L domain-like 506 913 - -
Vivi3g07452 1075 Gene3D Ribonuclease Inhibitor 538 895 IPR032675 -
Vivi3g07452 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 433 IPR027417 -
Vivi3g07452 1075 Coils Coil 122 142 - -
Vivi3g07452 1075 Gene3D Ribonuclease Inhibitor 896 1074 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07452 Vivi-Chr3 206284413 206290976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07452 202 387 WRKY Transcription Factor Family AT5G45050 26.178 6.19e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07452 - - vvo:131659801 1271.53