Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07449 ATGGCAGAACTTGTTGCTGGAGCATTCCTTTCGTCTTTCTTTCAAGTGATTTTTGATAGGTTGGCTTCAAGTAATTTCACTGACTATTTCCGTAGAGGCAAGCTTGACAAGTTGGTGGAGGAACTTGAGTCTACACTCGAGTCTATCAACCAAGTGTTGGATGATGCAGAGATTAAACAATACCAAATACCAAATGTCAAGAAGTGGCTTGGTGATGTTAAACATGCTATGTATGAGGCTGACCAACTCTTGGATGAGATTGCCACTGATGCACCATTGAAGAAGATAAGAGCTGAATCTCAACCTACTACCAGTAGGAATAACTATTTTGGTTATGTTTCAAGTTTTATTAATCCATTTGAATCTCGAGTCAAAGAATTGCTAAAGAATCTAAAGCATCTTGCTGAGCAAAAAGATGTGCTGGAATTGAAAAATGGATCTTTGGCTCGAAATGAAGTTGGAGTTAGTTCAAAACCTTTAGAAAGACCGCAAACTTCCTATTTGGTGGATGCATCGCAGATATATGGTAGAGATGATGAGAAAGATGAAATGATCAAATTTTTACTTTCAAACAATGGCAGTGACAACCAAACACCTGTATCTAGCATAGTTGGTCTAGGTGGGATGGGTAAGACCACCTTTGCTAAGCTTGTGTACAATGACAGTAGGATTGAGAATCATTTTGAACTTAAAGCATGGGTTTATGTTTCTGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCAAGTCATTTCATTCTCCAGCTGATGATGAGTCTATTCTCAATTTACTTCAACAGAGACTACAACGCGTACTAACGGGCAAAAAATACTTGCTTGTTTTAGATGATATATGGAACGGGAATGCGGATTGTTGGGAGCAGTTACTACTTCCTTTTAATCATGGATCTTTTGGAAGTAAGATTATTGCGACAACACGTGACAAGGATGTAGCACATGTTCTGAATTCCACAAAGATATTTGAATTACAGCAATTGGAAAAAAAAGATTGTTGGAGTTTATTTGTGACACATGCGTTTCATGGCAAAAATGTGTGCGATAATCCAAACCTTGAATTAATTGGCAAAAAAATATTGGAAAAGTGTGGAGGATTGCCATTAGCTGTAAAAACAATGGGCCAACTCTTGCGAAAAAAATTCTCTCAGCATGAATGGATGAAGATATTGGAGACTGATTTGTGGCGTTTATCAGAAGGGGACAACAACATTAACCCAGTGCTGAGATTGAGTTACCATAATCTACCTTCCAATCATAAACGTTGTTTTGCTTATTGTTCTATATTTCCTAAAGGTTATCACTTTGAAAAATGTGAATTAATCAGGATTTGGATGGCAGAAGGTTTGCTTAAGTGTTGCAGAACAGAAAAAAGTGAAGAAGAGTTGGGTAATGAAATTTTTGGTGATCTTGAGTCAATTTCATTTTTCCAACAATCAGCCTACTATTATTCTACCATGCATGACCTTGTCAATGATTTGGCTGATTCAGTGTTAGGAGAATTTTGTATGCGAATAAACGAAGCTAAGGTGGAAGGTATCCCTGGAAGGACACGTCACATTAGATGGTCTCTTCAATCAAATTTTGTTGACAAATTACTAGAGCCAATTTGTGAGCTTAAGGGCCTACGTAGTCTTTTATTAGAAGACCACTTTGGTATATCGATAAGCCGCAATGTGCAACGTGATATGTTTTCAAGACTAAAATATTTGCGAATGTTATCATTATATTATTGCGGCATCTCAGAGCTAGTAGATGAGATAAGCAATTTAAAGCTTCTGCGTTATCTAGATCTTTCTCGTAATAGAATTTCAAGGTTACCTGACACCATTTGTATGCTATATAATTTGCAAACACTCTTGTTGAATGGATGTAATGAATTGACTGAGCTCCCTTCAAATTTTTACAAACTCATCAATTTACGCCATCTTGAACTTCCCTATTCTATAATGAAAATGCCAAAGAATATAGGAAGTCTAAGCAATCTCCAAACCTTGAATTTTTTTACAGTGGAAGAGCAGAACGGATCAGATCTTAAGGAGTTGGAGAAACTAAACCATCTTCATGGAACAATTTATATTGAAGGGTTGGGTAAAGTCATTGATCCTACAGATGTTACAACAAGAAGTTTGAAAGATAAGATGTATTTGGAAGAAATAGAGATGATATTTAATGGAGGAAGAGAAGATATGGATGGATCAATAGTTGAAAGCAATGTATCTGTCTTGGAGACTCTTCAACCAAATAGTAACTTGAAGAAGCTAACCATCAGAATGTACAGAGGTAATAGCTTTTCTAATTGGCTAAGTGGTTGTCATTTACTCAAGATGCTTTATATTTCAGACTGTCATGGAATAAAGATCATCGGAAAAGAGTTATCCAGCAATAACTTCAACTCTCTTGAAATTTTGATCTTTGAAAATATGGACAATTTGGAGGAATGGTTATGTATTGATGGGTTTCCTTTACTTAAAGAGCTTTATATAATAAATTGTCCCAAATTGAAAAGGGTATCACTGCCTCAACACCTTCCTTCATTAGAGATATTGGAGATTAGTGGTTGCAAAATGCTGGCCGTATCAATTCCCATTTGTGATAATATCGAAGAGTTAAAAATAAAGAGATGTGGTCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAAAGGTTCAGCCTTCGTGAAAATCAGTACATCGAGTTCCCCATGGTTCATTTAATCAACAATCCCAATCTGGAATTATTAAAGTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTGGATTTGTGTTGTTATAATTCTCTTTGGGAATTTTCAATAACAGGATGGAAGTCCTCCTCCTTGCCTTTTTCACCACACTTGTTCACCCTTCTTAATGCTCTAGGGCTGTCTAATTGTCCAGAATTAGAATGTTTTCCTATGGGAGGTTTCCCTTCCAACTTGATCGATCTTAAAATAGTTAATTGTCCTAAATTGAAAGCTTCGAGAGAGGACTGGCGTTGTCTCCACCACAAATCTAAAGTTTATATTATTATTATTCACAATTGCGCTAGTCTTGAGCACTTGCCAGAGGAGTGGGGTTCCATTTTTGATTTGGAGATTGAAGATTGTCCATTACTTAAGGAGAAGTACCAAAAGGAGGGAGGAGATCGTTGGCATACAATTAGTCACATCCCTGAAGTGATAATTGACGGTTCTTACCAGACTTCTTTTATTTCGGAAGAGGAAATGAGTGACTGTGACAGTGACGAGTCTATGTAA 3282 0.3665 MAELVAGAFLSSFFQVIFDRLASSNFTDYFRRGKLDKLVEELESTLESINQVLDDAEIKQYQIPNVKKWLGDVKHAMYEADQLLDEIATDAPLKKIRAESQPTTSRNNYFGYVSSFINPFESRVKELLKNLKHLAEQKDVLELKNGSLARNEVGVSSKPLERPQTSYLVDASQIYGRDDEKDEMIKFLLSNNGSDNQTPVSSIVGLGGMGKTTFAKLVYNDSRIENHFELKAWVYVSESFDVVGLTKAILKSFHSPADDESILNLLQQRLQRVLTGKKYLLVLDDIWNGNADCWEQLLLPFNHGSFGSKIIATTRDKDVAHVLNSTKIFELQQLEKKDCWSLFVTHAFHGKNVCDNPNLELIGKKILEKCGGLPLAVKTMGQLLRKKFSQHEWMKILETDLWRLSEGDNNINPVLRLSYHNLPSNHKRCFAYCSIFPKGYHFEKCELIRIWMAEGLLKCCRTEKSEEELGNEIFGDLESISFFQQSAYYYSTMHDLVNDLADSVLGEFCMRINEAKVEGIPGRTRHIRWSLQSNFVDKLLEPICELKGLRSLLLEDHFGISISRNVQRDMFSRLKYLRMLSLYYCGISELVDEISNLKLLRYLDLSRNRISRLPDTICMLYNLQTLLLNGCNELTELPSNFYKLINLRHLELPYSIMKMPKNIGSLSNLQTLNFFTVEEQNGSDLKELEKLNHLHGTIYIEGLGKVIDPTDVTTRSLKDKMYLEEIEMIFNGGREDMDGSIVESNVSVLETLQPNSNLKKLTIRMYRGNSFSNWLSGCHLLKMLYISDCHGIKIIGKELSSNNFNSLEILIFENMDNLEEWLCIDGFPLLKELYIINCPKLKRVSLPQHLPSLEILEISGCKMLAVSIPICDNIEELKIKRCGRILINELSSSLKRFSLRENQYIEFPMVHLINNPNLELLKLDFKDFVECPSLDLCCYNSLWEFSITGWKSSSLPFSPHLFTLLNALGLSNCPELECFPMGGFPSNLIDLKIVNCPKLKASREDWRCLHHKSKVYIIIIHNCASLEHLPEEWGSIFDLEIEDCPLLKEKYQKEGGDRWHTISHIPEVIIDGSYQTSFISEEEMSDCDSDESM 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07449 1093 Gene3D Ribonuclease Inhibitor 517 702 IPR032675 -
Vivi3g07449 1093 Coils Coil 35 59 - -
Vivi3g07449 1093 PANTHER DISEASE RESISTANCE PROTEIN RP 39 889 IPR044974 GO:0006952
Vivi3g07449 1093 Gene3D Ribonuclease Inhibitor 703 1029 IPR032675 -
Vivi3g07449 1093 Gene3D - 333 418 IPR042197 -
Vivi3g07449 1093 Coils Coil 124 144 - -
Vivi3g07449 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 433 IPR027417 -
Vivi3g07449 1093 PRINTS Disease resistance protein signature 370 384 - -
Vivi3g07449 1093 PRINTS Disease resistance protein signature 273 287 - -
Vivi3g07449 1093 PRINTS Disease resistance protein signature 200 215 - -
Vivi3g07449 1093 PRINTS Disease resistance protein signature 848 864 - -
Vivi3g07449 1093 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Vivi3g07449 1093 Pfam Rx N-terminal domain 9 96 IPR041118 -
Vivi3g07449 1093 SUPERFAMILY RNI-like 801 1044 - -
Vivi3g07449 1093 FunFam Probable disease resistance protein At1g61300 157 327 - -
Vivi3g07449 1093 Gene3D - 419 503 IPR036388 -
Vivi3g07449 1093 Pfam NB-ARC domain 178 419 IPR002182 GO:0043531
Vivi3g07449 1093 Gene3D - 14 139 - -
Vivi3g07449 1093 SUPERFAMILY L domain-like 492 865 - -
Vivi3g07449 1093 Gene3D - 161 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07449 Vivi-Chr3 206236577 206256325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07449 203 861 WRKY Transcription Factor Family AT5G45050 23.239 1.71e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07449 - - vvo:131659801 1321.22