Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07441 ATGAAAGAAATGATTGTGGAGGCATTTCTTTCGTCTTTTTTTGGTTTTGTTTTTGAGAGTCTGGCTTCAAGTAATTTAACAGACTACTTCCGTAGAGTTAAAGTTGACACACTGGTGGATAAACTTGAGTCTATACTCAATTCTATCAACAAAGTCTTGGATGATGCAGAGAAGAAGCAGTACGAGAATCCAGACGTGAAGACATGGCTTGGTGATGTTAAACATGCTATGTATGAAGCCGACCAACTCTTGGATGAGATTGCCACTGATGCACCGTTGAAGAAGATGAGAGCTGAATCTCAACCATCCAGCAGCGTTGTTTCCAACTTCATTCCAACTTTTACTAATCCATTTAAAGCTAGGCTCAAAGAATTGATAGAGATCCTAGATTCTCTTGCAGAGCAGAAGGATAAGCTGCAACTAAAAACAAGAGTGCGTGCTTATAACAGAGATGGAGCCGTTTCGAAATTTTCAGAAAGACTACCAACTACATATTTGGTGGATGCGTCCCAGATATATGGTAGAGATGATGAGAAAGATGAAATGGTTGAGTTTCTACTTTCAAACAATGACAGTGGCAACCAGACACCGACACCTGTATCTAGCATAGTGGGTCTGGGAGGGATGGGCAAGACCACCTTTGCTAAGCTTGTGTACAATGATAGTAGGATTGAAGATCATTTTGAACTTAAAGCATGGGTTTATGTTTCTGAATCTTTTGATGTTGTTGGGCTCACCAAAGCAATTCTCAAGTCATTTCATTCTCCAGCTGATGATGAATCTATTCTCAATTTACTTCAACAGAAACTGCAAGACAAACTAATGGGCAAAAAATACTTGCTTGTTTTAGATGATATCTGGAACGGGAATGCAGATTGTTGGGAGCAGTTACTACTTCCTTTTAATCATGGATCTTATGGAAGTAAGATTATAGTGACAACACGTGACAAGGAGGTAGCAAATGTTTTGAAATCCTCCAAGTTACTTGATTTACAGAAATTGGGGAAAAGCGATTGTTGGAGTTTATTTGCAACACATGCGTTTCATGGCAAAAATGTGTGTGAAAATCCAAACCTTGAATCAATTGGCAAAAGAATTGTGGAGAAGTGTGAAGGATTGCCTTTAGCTGTAAAAACAATGGGCCAACTCTTGCGGAAAAAATTCTCTCAACATGAATGGATGAAGATATTGGAGACTGATATGTGGCGTTTATTAGATGGGGACAACAACATTAACCCAGTGCTGAGATTGAGTTACCATAATCTACCTTCCAATCATAAACGTTGTTTTGCGTATTGTTCTATATTTCCTAAAGGTTATTTGTTTAGAAAAGTTGAATTAATTAGGATTTGGATGGCAGAAGGTTTGCTTAAGTGTTGCAGACAAGAAAAAAGTGAAGAAGAGTTAGGTAATGAAATTGTTTGTGATCTTCAGTCAATTTCATTTTTCCAACAATCATTCCACTATTTCTTTGACATGCATGACCTTGTCAATGATTTAGCTAAATCAGTGTCAGGAGAATTTTGTATGCAAATAGAGGAAGCCAAGGTGGAAGGTATCCCTGAAAGGACACGTCACATTAGGTGGTCTCTTCAATTAAATTTTGTTGAAAAATTACTAGAGCCAATTTGTGAACTTAAGGGACTACGCAGTCTGTTACTAAAAGGCTATCCTTCTATGTTGATAAGCAACACTGTGCAGCGTGACATGTTTTCAAGACTAAAAGATTTGCGAATGTTATCATTACATGGTTGCGGCATCTCAGAGGTAGTTGATGAAATAAGCAATTTAAAGCTTTTGCGTTATCTAGACCTTTCTCTTACTGGAATTTCAAGCTTACCTAATACCATTTGTATGTTGTGTAATTTGCAAACACTCTTGTTGCGTGGCTGTTCCAAATTGACTGAGCTCCCTTCAAATTTTTCCAAACTCGTCAATTTACGTCATCTTGTACTTCCCTATTCTATAAAGAAAATTCCAAAGAATATAGGAAGTCTAAGCAATCTCCAAAACTTGTCTTGTTTTATAGTGGAAGAGCAAAATGGATCAGATCTTAAGGAGTTGGAGAAACTAAACCTTCTTCGTGGAACAATTCATATTAAAGGGTTGGGTAAAGTCATTGATCCTACAAATGTTGCTACAAGAATTTTGAAAGATAAGAAGTATTTGGAAGAAATAGATATGACATTTGATGTTGGAAGAATTTATGGCGAATCAATAGTTGAAAGCAATGCATCTGTCTTGAAGGCTCTTCAACCAAATAGTAACTTGAAGATGCTCACCATTAGAGAGTACAGAGGTAATAGCTTTCCAAATTGGCTAAGTGGTTGTCATTTACCCAACTTAGTATCTCTTAAATTGGAGTACTGTGGATTATGTTCCCATTTGCCACCACTTGGGCAGATCCCCTCTCTCAAGAAGCTTTATATTTCAGGCTGTCATGCAATAAAGATCATCGGAAAAGAGTTTTCCAATAATAACTTCAAGTATCTTGAATCTTTAAGTTTTGCGAGGATGAACAATTGGGAGGAATGGTTAGGTATTGAAGGATTTCCTTTACTTACAGAGCTTTCTATTACAAATTGTCCCAAATTGAAAAGGATATCACTGCCTCAACACCTTCCTTCATTACAGATGTTGGTGATTACTGGTTGCAAAATGCTGGACGTATCAATTCCCAATGGTGATAATATCACAGTCTTGTATATAAAGGAATGTGATCGAATTTTATTAAATAAATTGTCATCCAGCTTGAAAAAGTTTGTCCTTGGTAAAGTTGAGTATGTTGAATTCTCCATGGTTCATTTAATGAACTGCCCCTTTCTGGAAGAGTTGGTGTTGGATTTCAAAGACTTTGTAGAATGTCCCTCTTTGGATTTGTGTTGTTATAACTCTCTGTTGGAACTTTCAATAACAGGATGGAAGTTCTCCTCCTTGCCTTTTTCATTACACTTGTTCACCAGTCTTACACATCTAAACATCTGTGGTTGTCCTAAATTGATAGCTTCGAAAGAGGAATGGGGTTTTCTTCACTTCAAATCTCTTCGTGGTATATGTTTTGAAAATTGCCCTAGTCTTGAGCACTTGCCAGAGGAGTGGGGTTCCGTTGGGTCTTTGAAGATTAGAGACTGTCCATTACTTAAGGAAAAGTACCAAAAGGAGGGAGGAGAGCATTGGCATACAATTAGTCACATCCCTTATGTGGAAATTGACGATATTTTGCAGGAATAG 3231 0.3742 MKEMIVEAFLSSFFGFVFESLASSNLTDYFRRVKVDTLVDKLESILNSINKVLDDAEKKQYENPDVKTWLGDVKHAMYEADQLLDEIATDAPLKKMRAESQPSSSVVSNFIPTFTNPFKARLKELIEILDSLAEQKDKLQLKTRVRAYNRDGAVSKFSERLPTTYLVDASQIYGRDDEKDEMVEFLLSNNDSGNQTPTPVSSIVGLGGMGKTTFAKLVYNDSRIEDHFELKAWVYVSESFDVVGLTKAILKSFHSPADDESILNLLQQKLQDKLMGKKYLLVLDDIWNGNADCWEQLLLPFNHGSYGSKIIVTTRDKEVANVLKSSKLLDLQKLGKSDCWSLFATHAFHGKNVCENPNLESIGKRIVEKCEGLPLAVKTMGQLLRKKFSQHEWMKILETDMWRLLDGDNNINPVLRLSYHNLPSNHKRCFAYCSIFPKGYLFRKVELIRIWMAEGLLKCCRQEKSEEELGNEIVCDLQSISFFQQSFHYFFDMHDLVNDLAKSVSGEFCMQIEEAKVEGIPERTRHIRWSLQLNFVEKLLEPICELKGLRSLLLKGYPSMLISNTVQRDMFSRLKDLRMLSLHGCGISEVVDEISNLKLLRYLDLSLTGISSLPNTICMLCNLQTLLLRGCSKLTELPSNFSKLVNLRHLVLPYSIKKIPKNIGSLSNLQNLSCFIVEEQNGSDLKELEKLNLLRGTIHIKGLGKVIDPTNVATRILKDKKYLEEIDMTFDVGRIYGESIVESNASVLKALQPNSNLKMLTIREYRGNSFPNWLSGCHLPNLVSLKLEYCGLCSHLPPLGQIPSLKKLYISGCHAIKIIGKEFSNNNFKYLESLSFARMNNWEEWLGIEGFPLLTELSITNCPKLKRISLPQHLPSLQMLVITGCKMLDVSIPNGDNITVLYIKECDRILLNKLSSSLKKFVLGKVEYVEFSMVHLMNCPFLEELVLDFKDFVECPSLDLCCYNSLLELSITGWKFSSLPFSLHLFTSLTHLNICGCPKLIASKEEWGFLHFKSLRGICFENCPSLEHLPEEWGSVGSLKIRDCPLLKEKYQKEGGEHWHTISHIPYVEIDDILQE 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07441 1076 Gene3D Ribonuclease Inhibitor 870 1054 IPR032675 -
Vivi3g07441 1076 Gene3D Ribonuclease Inhibitor 528 869 IPR032675 -
Vivi3g07441 1076 Gene3D - 419 504 IPR036388 -
Vivi3g07441 1076 PANTHER DISEASE RESISTANCE PROTEIN RP 39 868 IPR044974 GO:0006952
Vivi3g07441 1076 Pfam NB-ARC domain 177 399 IPR002182 GO:0043531
Vivi3g07441 1076 SUPERFAMILY RNI-like 825 1044 - -
Vivi3g07441 1076 SUPERFAMILY L domain-like 493 892 - -
Vivi3g07441 1076 Coils Coil 39 59 - -
Vivi3g07441 1076 Gene3D - 333 418 IPR042197 -
Vivi3g07441 1076 PRINTS Disease resistance protein signature 200 215 - -
Vivi3g07441 1076 PRINTS Disease resistance protein signature 273 287 - -
Vivi3g07441 1076 PRINTS Disease resistance protein signature 370 384 - -
Vivi3g07441 1076 PRINTS Disease resistance protein signature 872 888 - -
Vivi3g07441 1076 Gene3D - 155 329 IPR027417 -
Vivi3g07441 1076 Coils Coil 122 142 - -
Vivi3g07441 1076 Pfam Rx N-terminal domain 16 100 IPR041118 -
Vivi3g07441 1076 Gene3D - 14 143 - -
Vivi3g07441 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07441 Vivi-Chr3 206145252 206150850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07441 203 439 WRKY Transcription Factor Family AT5G45050 24.797 1.01e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07441 - - vvo:131659801 1266.52