Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07415 ATGGCAGGATTGATGGTTGCAGGAGCTGTTCTTACCCCTATCATTCAATTTACTATTGAGAGTCTTGCCTCAAAATATTTCAAAGACCTCTTCAATAAACGGTTGCTGGAAAAACTTAAAATCACATTGAATTCTATCAACAAAGTCTTGGAAGATGCAGAGACAAAGCAGTACCAGAATGATGAGGTGAGGATTTGGCTTGACAATCTAAAGCATGAGGTATATGAAGTAGATCAGCTGTTGGATGAGATTGCTGCTAGTGCACGAAAAACGAGTAAGAGAAAGGTTAAATGCTTTAGCTCATTTTTTCCAAATCAGTTTAAATCTAGGATCAAAGACTTGCTCGATAAGCTAAAAGATCTTTTAAAGCATAGTGATGTTATGGGATTGAAAGAAGGAACAAGTGCTCGTAATGAAGTTGAAGTCGGTCCGAATTTTTCAAAAAGACCGCCAACGACGTCTTTGGTGGATGAATCTCTCATATGTGGTAGAAGGGTTGAAAAGGAGAAAATTGTCAGTTTCTTACTTTTAGACAATGGTAGTAGTAGCAACCACACACCAATACTCAGCATAATTGGTCTTGGTGGGATGGGTAAGACCACCCTTGCTCGGCTCGTCTACAATGACAACAAGGTGCAAAAGTGTTTTGAACTTAAAGCTTGGGTCTATGTTTCAAATCCATTTGATATTACCAGACTCACTAAAGAAATTCTCGAGCAATTTAATTCTTCACCAAATAGTGAAAGCTTGGAAATACTCCAACGCCAATTGCAACAGAAGGTAACAGGCAAGAAATGTTTGCTTGTTCTAGATGATATTTGGAACGCAAATGAGAAAAGTTGGAATCATTTACTAACTCCCTTTAACAAAGGATCTTCTGGAAGTAAAATTATTGTGACCACACGAAATAAGGACGATGCATTAGCCATGGAATCTGCCGAGTTATTTGAATTAGAAAAATTGGGGGAGACTGATTGTTGGAATTTATTTGTGACACATGCTTTTCGCAACAAAAACGTGAGTGAATATCCAGATTATGAATCAATTGGAAGGATGATTCTAGACGACAAGTGTGGAGGGTTGCCATTAGCCGTGGAATCAATGGGGAAGCTCTTGAGAAGAAAATTCTCTAAAAGTGAATGGGATAAAATATTAAAGACTGATATGTGGTGTCTATCAGAGAGAGACAGTGACATAAATCCAGTATTGAGACTGAGTTACCATAATCTTCCTTCCATTTCGAAGCGATGTTTTGCTTATTGTTCCATATTTCCCAGGGGTTATACGTTTCAAAAGAACAATTTAATCAATCTTTGGATGACATATGGTTTGTTGAACTCTTACAAAAGTGTCAAAAGTAAAGAAGAGTTGGGTAGTGAATCGTTTGAAGATCTTGAATCAATTTCATTTTTCCAAAGATCACTAGATTTTGATGGTTGTTTTGTCATGCATGATCTTGTCAATGATTTGGCAAAATCAGAGTCTCGAGACTTTTGCTTCCAAGTTAAAGGTGATAATGTGGAAGATATATCTGAAAGGACACGCCACATTTCATGTTCTCTTTATTTGAAAGCCGACGATGAGATATTAAAGCACATTTATAGAGCTAAGGGATTACACAGCTTGTTGGTAGAAACACCAAGAGATGGTGGTAAACGCTTCTTGATAAGCAACGATGTGCAATGTGATTTGTTTTCAAAGGTAAAACATTTGCGGATGTTGTCGTTTTGTGGTGTTAGAGATGAACACATAAAGTTACAACTAGGAGTACAGATAGGCAATTTAAAGTTTTTGCGCTATCTAGACGTGTCTTGGACAAGTATTCACATGTTGCCTGATTCTATTTGTGAGCTTTACAATTTAGAGACACTGATATTGGAAGGGTGTTTTAGTTTCATGGTACTTCCTAAAGATTTTTTCAAACTTGACCATTTACGCTATCTTAATCTGGAAGGAACTGCAATAAGGGAGATGCCAAAGAACATAAGGAAACTAAACCATCTACAAATGCTGACTAATTTTTGTGTGGGAGCTTCGAGTGGGTCTGATATTGAGGAGTTGGAAAATCTCAATCTTCTTCAAGGAAAACTTTGTCTTTCAAGATTAAACAATGTCACTGATCCAACACATGCCGTAAAGACCCGTTTGCAAGATAAGAAGTTTTTAGAAGAAATACATATGAAATATGATAGTTCAGTAGTGGAAAGCAATGTGTCTGTCTTGGACGCCCTTCAACCAAATAACAATCTGAAGAGGCTCACTATTGAGAACTACAATGGCAATATGTTTCCAAATTGGCTAAGTGGTTGTGATTTACCCAACTTAATATCTCTTAAACTGAAGAACTGTAATGGAATAAAGATCATCGACAATAACTCAACAAATGTCCCGTTCAAGTCCCTTGAAGTTTTGGAATTTGACTCCATGTACGAGTGGGAGGAATGGGTATGTATTGAAGGGTTTCCTCGGCTTAAAGAAATTTCTATAACTGATTGTCCCAAATTGAAAAGAGCACTCCCTCCACACCTTCCTTCATTACATAAATTGGTGATTAGTGGTTGCAAAATGCTGGACGTGTCAATTCCCAATTGTGATGAAATCAGAGTGTTGGAACTAAGGAATTGTAAGCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAAAGGTTTGTCCTTCGTGGAAATCAGTATGTTGAGTTCTCCATGGATCATTTAATCAACAATCCCTTTCTGGAATCGTTGGATTTGGATTTCAAGGACATTGTAGAATGTCCCTCATTTGATTTGTGCTGTTATAACTCTCTGTCCGAACTTTCAATAAGAAGATGGCAGTTCTCCTCCTTTCCTCTTTCACTACATTTGTTCACCAATCTTGATTTTCTCTTATTGTTAGATTGTCCAAGGCTGGAGTCTTTTCCTATGGGAGGTTTTCCTTCCAACTTGAGGTATCTTCCAATAGTTAAATGTCCAAAACTAACTGCTTCCAGAGAGGAGTTGGGTTTATTCCAACTCAAATCTCTGGCTCATTTCCGTGTTGCTGATGATTTTGAAAATGTGGAGTCCTTCCCTGAGCAGAATCTACTGCCACCAACTCTTAAGTCTCTTTATTTGAGTAGTTGTTCAAAGCTTAGAATATTGAACTACAAGGGATTTCTCCACCTCAAATCTCTTAGTTATATACAGATTAACAACTGCCCTGGTCTTGAGAGTTTGCCGGAGGAGGGTCTACCCAACTCCCTTGATACTTTGTTTATTGTAAATTGTCCATTAGTTAAGGAGAAGTACAAAAAGGAGGGAGGAGAGCGTTGGCATACAATTTGTCACATCCCTACTGTGTGGATTGACCATATTTTGCAGCAATAG 3363 0.3776 MAGLMVAGAVLTPIIQFTIESLASKYFKDLFNKRLLEKLKITLNSINKVLEDAETKQYQNDEVRIWLDNLKHEVYEVDQLLDEIAASARKTSKRKVKCFSSFFPNQFKSRIKDLLDKLKDLLKHSDVMGLKEGTSARNEVEVGPNFSKRPPTTSLVDESLICGRRVEKEKIVSFLLLDNGSSSNHTPILSIIGLGGMGKTTLARLVYNDNKVQKCFELKAWVYVSNPFDITRLTKEILEQFNSSPNSESLEILQRQLQQKVTGKKCLLVLDDIWNANEKSWNHLLTPFNKGSSGSKIIVTTRNKDDALAMESAELFELEKLGETDCWNLFVTHAFRNKNVSEYPDYESIGRMILDDKCGGLPLAVESMGKLLRRKFSKSEWDKILKTDMWCLSERDSDINPVLRLSYHNLPSISKRCFAYCSIFPRGYTFQKNNLINLWMTYGLLNSYKSVKSKEELGSESFEDLESISFFQRSLDFDGCFVMHDLVNDLAKSESRDFCFQVKGDNVEDISERTRHISCSLYLKADDEILKHIYRAKGLHSLLVETPRDGGKRFLISNDVQCDLFSKVKHLRMLSFCGVRDEHIKLQLGVQIGNLKFLRYLDVSWTSIHMLPDSICELYNLETLILEGCFSFMVLPKDFFKLDHLRYLNLEGTAIREMPKNIRKLNHLQMLTNFCVGASSGSDIEELENLNLLQGKLCLSRLNNVTDPTHAVKTRLQDKKFLEEIHMKYDSSVVESNVSVLDALQPNNNLKRLTIENYNGNMFPNWLSGCDLPNLISLKLKNCNGIKIIDNNSTNVPFKSLEVLEFDSMYEWEEWVCIEGFPRLKEISITDCPKLKRALPPHLPSLHKLVISGCKMLDVSIPNCDEIRVLELRNCKRILINELSSSLKRFVLRGNQYVEFSMDHLINNPFLESLDLDFKDIVECPSFDLCCYNSLSELSIRRWQFSSFPLSLHLFTNLDFLLLLDCPRLESFPMGGFPSNLRYLPIVKCPKLTASREELGLFQLKSLAHFRVADDFENVESFPEQNLLPPTLKSLYLSSCSKLRILNYKGFLHLKSLSYIQINNCPGLESLPEEGLPNSLDTLFIVNCPLVKEKYKKEGGERWHTICHIPTVWIDHILQQ 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07415 1120 Gene3D Ribonuclease Inhibitor 882 1119 IPR032675 -
Vivi3g07415 1120 Gene3D - 407 495 IPR036388 -
Vivi3g07415 1120 Pfam NB-ARC domain 183 386 IPR002182 GO:0043531
Vivi3g07415 1120 Gene3D - 320 406 IPR042197 -
Vivi3g07415 1120 Gene3D - 22 124 - -
Vivi3g07415 1120 Coils Coil 36 56 - -
Vivi3g07415 1120 Gene3D - 150 315 IPR027417 -
Vivi3g07415 1120 Gene3D Ribonuclease Inhibitor 511 881 IPR032675 -
Vivi3g07415 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 421 IPR027417 -
Vivi3g07415 1120 SUPERFAMILY L domain-like 482 872 - -
Vivi3g07415 1120 PANTHER DISEASE RESISTANCE PROTEIN RP 36 835 IPR044974 GO:0006952
Vivi3g07415 1120 SUPERFAMILY RNI-like 798 1088 - -
Vivi3g07415 1120 Pfam Rx N-terminal domain 18 93 IPR041118 -
Vivi3g07415 1120 PRINTS Disease resistance protein signature 358 372 - -
Vivi3g07415 1120 PRINTS Disease resistance protein signature 260 274 - -
Vivi3g07415 1120 PRINTS Disease resistance protein signature 188 203 - -
Vivi3g07415 1120 PRINTS Disease resistance protein signature 841 857 - -
Vivi3g07415 1120 FunFam Probable disease resistance protein At1g61300 147 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07415 Vivi-Chr3 205512306 205532053 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07415 592 671 WRKY Transcription Factor Family AT4G12020 41.463 6.49e-06 48.9